RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 DAPL1A0PJW8 107 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 TRAPPC13A5PLN9 417 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 NARSO43776 548 aaKnown RBP14.27□□□□□ -0.12
BRCC3-201ENST00000330045 ALX3O95076 343 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 CHRNB1P11230 501 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 ARSBP15848 533 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 BMP7P18075 431 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 FXYD6P3P58550 94 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 RPS15AP62244 130 aaKnown RBP14.27□□□□□ -0.12
BRCC3-201ENST00000330045 SNRPNP63162 240 aaKnown RBP14.27□□□□□ -0.12
BRCC3-201ENST00000330045 RAB30Q15771 203 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 CCDC85BQ15834 202 aaPredicted RBP14.27□□□□□ -0.12
BRCC3-201ENST00000330045 COL13A1Q5TAT6 717 aaPredicted RBP14.27□□□□□ -0.12
BRCC3-201ENST00000330045 HBMQ6B0K9 141 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 ASPGQ86U10 573 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 OR4N5Q8IXE1 308 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 SAMD14Q8IZD0 417 aaPredicted RBP14.27□□□□□ -0.12
BRCC3-201ENST00000330045 OR4M2Q8NGB6 313 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 TRIM63Q969Q1 353 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 HS6ST2Q96MM7 605 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 TIMP4Q99727 224 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 HDHD2Q9H0R4 259 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 TRPV5Q9NQA5 729 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 HEBP2Q9Y5Z4 205 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 BTN3A3O00478 584 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 BHLHE40O14503 412 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 HRO43593 1189 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 CPNE3O75131 537 aaKnown RBP14.27□□□□□ -0.13
BRCC3-201ENST00000330045 C1QBP02746 253 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 THBS1P07996 1170 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 PRG2P13727 222 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 IGFALSP35858 605 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 RRAS2P62070 204 aaPredicted RBP14.27□□□□□ -0.13
BRCC3-201ENST00000330045 KLHL12Q53G59 568 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 PRPF38BQ5VTL8 546 aaKnown RBP14.27□□□□□ -0.13
BRCC3-201ENST00000330045 OR5M3Q8NGP4 307 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 PFN4Q8NHR9 129 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 LCN9Q8WX39 176 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 SLC17A9Q9BYT1 436 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 ENKD1Q9H0I2 346 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 S1PR5Q9H228 398 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 NIPAL2Q9H841 368 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 TRIM36Q9NQ86 728 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 CYSLTR2Q9NS75 346 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 OR6C2Q9NZP2 312 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 KCMF1Q9P0J7 381 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 PHF11Q9UIL8 331 aa14.27□□□□□ -0.13
BRCC3-201ENST00000330045 ZNF223Q9UK11 482 aaPredicted RBP14.27□□□□□ -0.13
BRCC3-201ENST00000330045 A0A1W2PQU0 124 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 INMT-MINDY4F8WBC2 141 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 PRKCAP17252 672 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 MAKP20794 623 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 SHC1P29353 583 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 SIM1P81133 766 aaPredicted RBP14.26□□□□□ -0.13
BRCC3-201ENST00000330045 GALK2Q01415 458 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 TNK1Q13470 666 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 GALEQ14376 348 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 MAPK14Q16539 360 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 WDR88Q6ZMY6 472 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 LRRC28Q86X40 367 aaPredicted RBP14.26□□□□□ -0.13
BRCC3-201ENST00000330045 PLCZ1Q86YW0 608 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 RNF113BQ8IZP6 322 aaKnown RBP14.26□□□□□ -0.13
BRCC3-201ENST00000330045 OR5W2Q8NH69 310 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 TMEM239Q8WW34 195 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 GFM1Q96RP9 751 aaKnown RBP14.26□□□□□ -0.13
BRCC3-201ENST00000330045 CDCA3Q99618 268 aaPredicted RBP14.26□□□□□ -0.13
BRCC3-201ENST00000330045 APOOQ9BUR5 198 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 HCAR1Q9BXC0 346 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 ATP13A2Q9NQ11 1180 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 C20orf141Q9NUB4 165 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 MCUBQ9NWR8 336 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 ARHGEF9O43307 516 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 SLC35G6P0C7Q6 338 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 GKN3PP0CG01 181 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 IFI30P13284 250 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 LAMP2P13473 410 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 F8A1P23610 371 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 HTR2AP28223 471 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 TALDO1P37837 337 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 SEC13P55735 322 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 OR1Q1Q15612 314 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 OR10H4Q8NGA5 316 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 NT5CQ8TCD5 201 aa14.26□□□□□ -0.13
BRCC3-201ENST00000330045 AHCYL2Q96HN2 611 aaKnown RBP14.26□□□□□ -0.13
BRCC3-201ENST00000330045 REM1O75628 298 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 TBXA2RP21731 343 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 TRMT12Q53H54 448 aaKnown RBP14.25□□□□□ -0.13
BRCC3-201ENST00000330045 ARL9Q6T311 187 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 TMEM184AQ6ZMB5 413 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 ZNF619Q8N2I2 560 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 LNX2Q8N448 690 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 OR14C36Q8NHC7 312 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 ZCCHC10Q8TBK6 192 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 KISS1RQ969F8 398 aaPredicted RBP14.25□□□□□ -0.13
BRCC3-201ENST00000330045 CREB3L1Q96BA8 519 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 ZNF350Q9GZX5 532 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 PPIL3Q9H2H8 161 aaKnown RBP14.25□□□□□ -0.13
BRCC3-201ENST00000330045 PIGUQ9H490 435 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 GALNT9Q9HCQ5 603 aa14.25□□□□□ -0.13
BRCC3-201ENST00000330045 ENAMQ9NRM1 1142 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms