RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 ADH6P28332 368 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 LSM6P62312 80 aaKnown RBP11.08□□□□□ -0.64
SHMT2-201ENST00000328923 BCL2L1Q07817 233 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 NAE1Q13564 534 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 SLC30A6Q6NXT4 461 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 NR2C2APQ86WQ0 139 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 SPICQ8N5J4 248 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 SAMD12Q8N8I0 201 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 RASGEF1AQ8N9B8 481 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 OR11G2Q8NGC1 345 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 NEIL3Q8TAT5 605 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 CD200R1Q8TD46 325 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 MYLIPQ8WY64 445 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 ROBO4Q8WZ75 1007 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 RAB3CQ96E17 227 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 LINGO1Q96FE5 620 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 BSCL2Q96G97 398 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-201ENST00000328923 SCLYQ96I15 445 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 OR1F2PQ96R84 312 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 TSSK6Q9BXA6 273 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 FAM117AQ9C073 453 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 ABCG8Q9H221 673 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 FTSJ1Q9UET6 329 aa11.08□□□□□ -0.64
SHMT2-201ENST00000328923 ZAR1LA6NP61 321 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 GFYI3L273 518 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 M0QZ92 97 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 SLC25A12O75746 678 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 OR2A4O95047 310 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 ACTL6AO96019 429 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 IFNA10P01566 189 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 RHOQP17081 205 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 LAG3P18627 525 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 PPIAP62937 165 aaKnown RBP11.07□□□□□ -0.64
SHMT2-201ENST00000328923 SPIBQ01892 262 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 SAPCD1Q5SSQ6 148 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 CXCL17Q6UXB2 119 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 HMGB4Q8WW32 186 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 HMCESQ96FZ2 354 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 LRIG1Q96JA1 1093 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 OR2A7Q96R45 310 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 OCSTAMPQ9BR26 566 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 TMED9Q9BVK6 235 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 CHRDQ9H2X0 955 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 HS3ST4Q9Y661 456 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 A8MVJ9 347 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 DVL2O14641 736 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 SLC28A2O43868 658 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 MPZL2O60487 215 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 EIF4E2O60573 245 aaKnown RBP11.07□□□□□ -0.64
SHMT2-201ENST00000328923 IDSP22304 550 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 AQP1P29972 269 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 AKR1C3P42330 323 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 TBX4P57082 545 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 PKIAP61925 76 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 ZNF239Q16600 458 aaKnown RBP11.07□□□□□ -0.64
SHMT2-201ENST00000328923 PTPRNQ16849 979 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 VMACQ2NL98 169 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 CRB2Q5IJ48 1285 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 SPNS3Q6ZMD2 512 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 LRRC28Q86X40 367 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-201ENST00000328923 STK40Q8N2I9 435 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 PRSS35Q8N3Z0 413 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 FAM46DQ8NEK8 389 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 ASB16Q96NS5 453 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 KLHL5Q96PQ7 755 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 F2RL3Q96RI0 385 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 CDCA3Q99618 268 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-201ENST00000328923 FUZQ9BT04 418 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 PINK1Q9BXM7 581 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 LRTM1Q9HBL6 345 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 TMEM248Q9NWD8 314 aa11.07□□□□□ -0.64
SHMT2-201ENST00000328923 MRPL15Q9P015 296 aaKnown RBP11.07□□□□□ -0.64
SHMT2-201ENST00000328923 SNAPC5O75971 98 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 PMP2P02689 132 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 RNH1P13489 461 aaKnown RBP11.06□□□□□ -0.64
SHMT2-201ENST00000328923 TYRP14679 529 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 RBMS1P29558 406 aaKnown RBP11.06□□□□□ -0.64
SHMT2-201ENST00000328923 FGF9P31371 208 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-201ENST00000328923 S100A3P33764 101 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 SOX18P35713 384 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 CHI3L1P36222 383 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-201ENST00000328923 RFX3P48380 749 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 RAB5CP51148 216 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 HCCSP53701 268 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 MRPS6P82932 125 aaKnown RBP11.06□□□□□ -0.64
SHMT2-201ENST00000328923 CDK6Q00534 326 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 NHLH2Q02577 135 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 SNTB2Q13425 540 aaKnown RBP11.06□□□□□ -0.64
SHMT2-201ENST00000328923 MFSD14CQ5VZR4 134 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 OR2W3Q7Z3T1 314 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 C15orf54Q8N8G6 183 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 OR4C15Q8NGM1 316 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 SPPL2AQ8TCT8 520 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 EEF1AKMT1Q8WVE0 214 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 THAP4Q8WY91 577 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 CPNE2Q96FN4 548 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-201ENST00000328923 MFFQ9GZY8 342 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 IPPKQ9H8X2 491 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 TBC1D17Q9HA65 648 aa11.06□□□□□ -0.64
SHMT2-201ENST00000328923 PRDM5Q9NQX1 630 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms