RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 FBXL3Q9UKT7 428 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 ZMIZ1Q9ULJ6 1067 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 PRKAB1Q9Y478 270 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 CCL15-CCL14A0A0B4J2E2 113 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 CHURC1-FNTBB4DL54 471 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 PRR23D1E9PI22 279 aaPredicted RBP11.91□□□□□ -0.5
CCDC60-201ENST00000327554 RTCAO00442 366 aaKnown RBP11.91□□□□□ -0.5
CCDC60-201ENST00000327554 TBX6O95947 436 aaPredicted RBP11.91□□□□□ -0.5
CCDC60-201ENST00000327554 PRR23D2P0DMB1 279 aaPredicted RBP11.91□□□□□ -0.5
CCDC60-201ENST00000327554 EPXP11678 715 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 HMGA1P17096 107 aaKnown RBP11.91□□□□□ -0.5
CCDC60-201ENST00000327554 XPAP23025 273 aaPredicted RBP11.91□□□□□ -0.5
CCDC60-201ENST00000327554 FPR3P25089 353 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 AHRP35869 848 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 STAT5AP42229 794 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 GPR4P46093 362 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 AKR1D1P51857 326 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 FGL1Q08830 312 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 TRAM2Q15035 370 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 CCL15Q16663 113 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 FAM110CQ1W6H9 321 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 FAM26DQ5JW98 314 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 LDLRAD1Q5T700 205 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 PIP5KL1Q5T9C9 394 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 ZNF626Q68DY1 528 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 NIPAL3Q6P499 406 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 NXPE4Q6UWF7 544 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 GSG1LQ6UXU4 331 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 ZNF620Q6ZNG0 422 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 CDH26Q8IXH8 852 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 PM20D2Q8IYS1 436 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 OR13C5Q8NGS8 318 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 PIGXQ8TBF5 258 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 THEM6Q8WUY1 208 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 OVCA2Q8WZ82 227 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 DIO2Q92813 273 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 GCDHQ92947 438 aaPredicted RBP11.91□□□□□ -0.5
CCDC60-201ENST00000327554 SLC35G5Q96KT7 338 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 SGPP1Q9BX95 441 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 ARL6Q9H0F7 186 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 BCL2L10Q9HD36 194 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 SLC6A20Q9NP91 592 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 PLPP1O14494 284 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 KLF4O43474 513 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 FRS3O43559 492 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 ITGA10O75578 1167 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 ASGR2P07307 311 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 ALPPL2P10696 532 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 STXBP1P61764 594 aaKnown RBP11.9□□□□□ -0.5
CCDC60-201ENST00000327554 PLD1Q13393 1074 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 MAPK14Q16539 360 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 ACSM3Q53FZ2 586 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 PLBD1Q6P4A8 553 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 ZC3H14Q6PJT7 736 aaKnown RBP11.9□□□□□ -0.5
CCDC60-201ENST00000327554 MEIOBQ8N635 442 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 TEX19Q8NA77 164 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 BBS10Q8TAM1 723 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 SLC5A11Q8WWX8 675 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 KLK6Q92876 244 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 EXOSC8Q96B26 276 aaKnown RBP11.9□□□□□ -0.5
CCDC60-201ENST00000327554 PARK7Q99497 189 aaKnown RBP11.9□□□□□ -0.5
CCDC60-201ENST00000327554 ESRP2Q9H6T0 727 aaKnown RBP11.9□□□□□ -0.5
CCDC60-201ENST00000327554 MED20Q9H944 212 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 NOX3Q9HBY0 568 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 TAS2R5Q9NYW4 299 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 TRPC4Q9UBN4 977 aa11.9□□□□□ -0.5
CCDC60-201ENST00000327554 ARPC4-TTLL3A0A0A6YYG9 625 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 DAPL1A0PJW8 107 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 CPSF4LA6NMK7 179 aaKnown RBP11.89□□□□□ -0.51
CCDC60-201ENST00000327554 BNIP3LO60238 219 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 HMGN1P05114 100 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 RB1P06400 928 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 TYRP1P17643 537 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 ANXA7P20073 488 aaKnown RBP11.89□□□□□ -0.51
CCDC60-201ENST00000327554 MST1P26927 711 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 PPP2R1BP30154 601 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 RECQLP46063 649 aaPredicted RBP11.89□□□□□ -0.51
CCDC60-201ENST00000327554 MAT1AQ00266 395 aaKnown RBP11.89□□□□□ -0.51
CCDC60-201ENST00000327554 RPTNQ6XPR3 784 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 HMGB4Q8WW32 186 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 KISS1RQ969F8 398 aaPredicted RBP11.89□□□□□ -0.51
CCDC60-201ENST00000327554 PPP1R16AQ96I34 528 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 OR1F2PQ96R84 312 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 TEX12Q9BXU0 123 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 QRSL1Q9H0R6 528 aaKnown RBP11.89□□□□□ -0.51
CCDC60-201ENST00000327554 FANCFQ9NPI8 374 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 CLEC4EQ9ULY5 219 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 GPR55Q9Y2T6 319 aaPredicted RBP11.89□□□□□ -0.51
CCDC60-201ENST00000327554 SLC6A5Q9Y345 797 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 NAP1L6A6NFF2 107 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 F8W036 122 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 ADAM12O43184 909 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 CREBL2O60519 120 aaPredicted RBP11.89□□□□□ -0.51
CCDC60-201ENST00000327554 ADAM11O75078 769 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 C1orf105O95561 183 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 MT-ND5P03915 603 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 PAICSP22234 425 aaKnown RBP11.89□□□□□ -0.51
CCDC60-201ENST00000327554 ACVR1BP36896 505 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 DEFA5Q01523 94 aa11.89□□□□□ -0.51
CCDC60-201ENST00000327554 SZRD1Q7Z422 152 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms