RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 COLEC10Q9Y6Z7 277 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 FAM171A2A8MVW0 826 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 STK25O00506 426 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 B3GALT2O43825 422 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 APODP05090 189 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 SYPP08247 313 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 OR12D2P58182 307 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 RPE65Q16518 533 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 CCDC58Q4VC31 144 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 Q5BKY6 102 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 ZNF628Q5EBL2 1059 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 ZNF542PQ5EBM4 170 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 ZNF836Q6ZNA1 936 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 ZSCAN2Q7Z7L9 614 aaPredicted RBP12□□□□□ -0.49
HMGCS1-201ENST00000325110 ETFBKMTQ8IXQ9 262 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 RDH10Q8IZV5 341 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 ARL14Q8N4G2 192 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 TOMM5Q8N4H5 51 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 UXS1Q8NBZ7 420 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 SNX33Q8WV41 574 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 TMEM239Q8WW34 195 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 COX14Q96I36 57 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 DHRS1Q96LJ7 313 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 RAB11FIP5Q9BXF6 653 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 SLC17A9Q9BYT1 436 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 C11orf49Q9H6J7 331 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 A0A1B0GVT2 93 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 E9PI62 339 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 MT-ND5P03915 603 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 HNRNPA1P09651 372 aaKnown RBP eCLIP12□□□□□ -0.493e-6■□□□□ 8
HMGCS1-201ENST00000325110 LIMK1P53667 647 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 SHC2P98077 582 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 E2F1Q01094 437 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 CRMP1Q14194 572 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 SUZ12Q15022 739 aaKnown RBP12□□□□□ -0.49
HMGCS1-201ENST00000325110 DEFB110Q30KQ9 67 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 SDE2Q6IQ49 451 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 MFSD12Q6NUT3 480 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 OAFQ86UD1 273 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 OR8H3Q8N146 312 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 RNF32Q9H0A6 362 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 MTHFD2LQ9H903 347 aaPredicted RBP12□□□□□ -0.49
HMGCS1-201ENST00000325110 SLC28A3Q9HAS3 691 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 TMEM27Q9HBJ8 222 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 COQ3Q9NZJ6 369 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 RPS6KB2Q9UBS0 482 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 SPATA2Q9UM82 520 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 MED31Q9Y3C7 131 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 SPACA6W5XKT8 324 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 ASCC3Q8N3C0 2202 aaKnown RBP12□□□□□ -0.49
HMGCS1-201ENST00000325110 DNAJB6O75190 326 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 SNRPBP14678 240 aaKnown RBP12□□□□□ -0.49
HMGCS1-201ENST00000325110 PRKCAP17252 672 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 FPR3P25089 353 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 PKLRP30613 574 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 HTR1FP30939 366 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 TRA2BP62995 288 aaKnown RBP12□□□□□ -0.49
HMGCS1-201ENST00000325110 GPLD1P80108 840 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 RUNX3Q13761 415 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 FCN2Q15485 313 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 BICRALQ6AI39 1079 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 ANKRD54Q6NXT1 300 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 MBOAT2Q6ZWT7 520 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 SLC44A3Q8N4M1 653 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 SDR9C7Q8NEX9 313 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 OR5T3Q8NGG3 340 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 OR2L8Q8NGY9 312 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 RERGQ96A58 199 aaPredicted RBP12□□□□□ -0.49
HMGCS1-201ENST00000325110 MS4A4EQ96PG1 132 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 GSDMCQ9BYG8 508 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 CBLCQ9ULV8 474 aa12□□□□□ -0.49
HMGCS1-201ENST00000325110 AK6Q9Y3D8 172 aaKnown RBP12□□□□□ -0.49
HMGCS1-201ENST00000325110 SIRT4Q9Y6E7 314 aaPredicted RBP12□□□□□ -0.49
HMGCS1-201ENST00000325110 MLLT3P42568 568 aaPredicted RBP11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 SF3A2Q15428 464 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 OR1Q1Q15612 314 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 MAPK14Q16539 360 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 KIAA1211LQ6NV74 962 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 SHISA5Q8N114 240 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 BPIFA2Q96DR5 249 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 OMA1Q96E52 524 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 SENP5Q96HI0 755 aaPredicted RBP11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 HS6ST2Q96MM7 605 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 ERMAPQ96PL5 475 aaPredicted RBP11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 TMEM43Q9BTV4 400 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 IL23AQ9NPF7 189 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 TBC1D29Q9UFV1 150 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 NDOR1Q9UHB4 597 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 ING4Q9UNL4 249 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 SF3B6Q9Y3B4 125 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 DNAH14Q0VDD8 3507 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 TRAPPC13A5PLN9 417 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 POM121BA6NF01 834 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 CENPBD1B2RD01 187 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 RGS13O14921 159 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 FABP7O15540 132 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 LANCL1O43813 399 aa11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 RNGTTO60942 597 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 NOS1APO75052 506 aaPredicted RBP11.99□□□□□ -0.49
HMGCS1-201ENST00000325110 SNRNP200O75643 2136 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms