RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 RAB40ALP0C0E4 278 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 CCNYL3P0C7X3 344 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 CT45A8P0DMV1 189 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 CT45A9P0DMV2 189 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 RRM2P31350 389 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 GABRA3P34903 492 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 ETV6P41212 452 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 P2RX3P56373 397 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 POU6F2P78424 691 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 DNASE1L3Q13609 305 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 GPAT3Q53EU6 434 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 CT45A2Q5DJT8 189 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 DCST2Q5T1A1 773 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 RSBN1Q5VWQ0 802 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 TYW3Q6IPR3 259 aaKnown RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 NPSR1Q6W5P4 371 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 FRRS1Q6ZNA5 592 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 BTLAQ7Z6A9 289 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 P2RY8Q86VZ1 359 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 KRT73Q86Y46 540 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 ZNF321PQ8N8H1 164 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 ZSCAN1Q8NBB4 408 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 SETD9Q8NE22 299 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 NFAM1Q8NET5 270 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 OR2Y1Q8NGV0 311 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 GPR151Q8TDV0 419 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 APOBEC4Q8WW27 367 aaKnown RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 ADAMTS14Q8WXS8 1223 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 RORBQ92753 470 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 WDR77Q9BQA1 342 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 SPATA5L1Q9BVQ7 753 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 NUDT9Q9BW91 350 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 GON7Q9BXV9 100 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 RSPO3Q9BXY4 272 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 FAM117AQ9C073 453 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 SEMA4CQ9C0C4 833 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 OR8D2Q9GZM6 311 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 NXF2Q9GZY0 626 aaKnown RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 IL1RAPQ9NPH3 570 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 FOXJ2Q9P0K8 574 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 C19orf25Q9UFG5 118 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 GPR55Q9Y2T6 319 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 V9GYQ6 96 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 SEC16AO15027 2179 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 A0A1W2PQ72 361 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 OR6C76A6NM76 312 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 SLC16A6O15403 523 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 FCMRO60667 390 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 STX11O75558 287 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 CCNKO75909 580 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 UMODP07911 640 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 UBL4AP11441 157 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 DRD5P21918 477 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 TRHRP34981 398 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 PPICP45877 212 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 KCNJ5P48544 419 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 ST13P50502 369 aaKnown RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 NOVA1P51513 510 aaKnown RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 IST1P53990 364 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 GP2P55259 537 aaKnown RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 COPZ1P61923 177 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 DCAF7P61962 342 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 CSNK2BP67870 215 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 IQCCQ4KMZ1 466 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 FAAH2Q6GMR7 532 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 IDO2Q6ZQW0 420 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 PIWIL3Q7Z3Z3 882 aaKnown RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 CPEB2Q7Z5Q1 589 aaKnown RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 VTCN1Q7Z7D3 282 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 LIX1LQ8IVB5 337 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 ESX1Q8N693 406 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 COX18Q8N8Q8 333 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 C17orf47Q8NEP4 570 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 B3GNT7Q8NFL0 401 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 OR10Q1Q8NGQ4 319 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 PIK3R3Q92569 461 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 FCGR1BQ92637 280 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 PROX1Q92786 737 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 ADIPOR1Q96A54 375 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 TPD52L3Q96J77 140 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 C7orf34Q96L11 122 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 COL21A1Q96P44 957 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 RBM4BQ9BQ04 359 aaKnown RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 RBM4Q9BWF3 364 aaKnown RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 ITPAQ9BY32 194 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 MTHFD2LQ9H903 347 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 FKBP14Q9NWM8 211 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 CCDC59Q9P031 241 aaKnown RBP11.79□□□□□ -0.52
DDX39A-202ENST00000324340 COPS7AQ9UBW8 275 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 MKLN1Q9UL63 735 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 PADI2Q9Y2J8 665 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 TPRKBQ9Y3C4 175 aa11.79□□□□□ -0.52
DDX39A-202ENST00000324340 GXYLT2A0PJZ3 443 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 FRG2CA6NGY1 282 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 AGAP5A6NIR3 686 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 CENPXA8MT69 81 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 LOC110117498-PIK3R3F6TDL0 507 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 KIAA0513O60268 411 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 DPM1O60762 260 aa11.78□□□□□ -0.52
DDX39A-202ENST00000324340 KCNK2O95069 426 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms