RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 RFX2P48378 723 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 RNF144AP50876 292 aaPredicted RBP20.73■□□□□ 0.91
PNKP-201ENST00000322344 CTBP2P56545 445 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 FXYD6P3P58550 94 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 DLX2Q07687 328 aaPredicted RBP20.73■□□□□ 0.91
PNKP-201ENST00000322344 EXOSC7Q15024 291 aaKnown RBP20.73■□□□□ 0.91
PNKP-201ENST00000322344 FIGNL1Q6PIW4 674 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 OOSP2Q86WS3 158 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 CAMKK1Q8N5S9 505 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 SIRT6Q8N6T7 355 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 ATP6V1C2Q8NEY4 427 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 OR13H1Q8NG92 308 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 OR51G2Q8NGK0 314 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 PFN4Q8NHR9 129 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 DOK4Q8TEW6 326 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 TMED9Q9BVK6 235 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 MOV10Q9HCE1 1003 aaKnown RBP20.73■□□□□ 0.91
PNKP-201ENST00000322344 INPP5EQ9NRR6 644 aa20.73■□□□□ 0.91
PNKP-201ENST00000322344 C10orf142B7Z368 130 aa20.72■□□□□ 0.91
PNKP-201ENST00000322344 LRRTM2O43300 516 aa20.72■□□□□ 0.91
PNKP-201ENST00000322344 CT62P0C5K7 136 aa20.72■□□□□ 0.91
PNKP-201ENST00000322344 GABRG2P18507 467 aa20.72■□□□□ 0.91
PNKP-201ENST00000322344 TBXA2RP21731 343 aa20.72■□□□□ 0.91
PNKP-201ENST00000322344 PTBP1P26599 531 aaKnown RBP eCLIP20.72■□□□□ 0.91
PNKP-201ENST00000322344 BMP8BP34820 402 aa20.72■□□□□ 0.91
PNKP-201ENST00000322344 TMEM31Q5JXX7 168 aa20.72■□□□□ 0.91
PNKP-201ENST00000322344 METAP1DQ6UB28 335 aaPredicted RBP20.72■□□□□ 0.91
PNKP-201ENST00000322344 ZNF517Q6ZMY9 492 aaPredicted RBP20.72■□□□□ 0.91
PNKP-201ENST00000322344 BMP8AQ7Z5Y6 402 aa20.72■□□□□ 0.91
PNKP-201ENST00000322344 SLC37A2Q8TED4 501 aa20.72■□□□□ 0.91
PNKP-201ENST00000322344 ANKRD9Q96BM1 317 aaPredicted RBP20.72■□□□□ 0.91
PNKP-201ENST00000322344 OTULINQ96BN8 352 aa20.72■□□□□ 0.91
PNKP-201ENST00000322344 BPIFA2Q96DR5 249 aa20.72■□□□□ 0.91
PNKP-201ENST00000322344 TBC1D17Q9HA65 648 aa20.72■□□□□ 0.91
PNKP-201ENST00000322344 CMC2Q9NRP2 79 aa20.72■□□□□ 0.91
PNKP-201ENST00000322344 NPIPA5A0A0B4J1W7 369 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 NPIPA7E9PJI5 369 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 NPIPA8P0DM63 369 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 DRD5P21918 477 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 VSX2P58304 361 aaPredicted RBP20.71■□□□□ 0.91
PNKP-201ENST00000322344 PRPF38BQ5VTL8 546 aaKnown RBP20.71■□□□□ 0.91
PNKP-201ENST00000322344 KLBQ86Z14 1044 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 SCAIQ8N9R8 606 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 NEIL3Q8TAT5 605 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 C20orf141Q9NUB4 165 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 MMP17Q9ULZ9 603 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 BAIAP2Q9UQB8 552 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 GOLGA4Q13439 2230 aaKnown RBP20.71■□□□□ 0.91
PNKP-201ENST00000322344 GXYLT2A0PJZ3 443 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 OR5K3A6NET4 321 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 FAM183AA6NL82 134 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 CCNKO75909 580 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 CSF3P09919 207 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 HTR3AP46098 478 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 TFF2Q03403 129 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 MZT2AQ6P582 158 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 SMARCD3Q6STE5 483 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 SLC22A18ASQ8N1D0 253 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 SLC43A2Q8N370 569 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 HDHD5Q9BXW7 423 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 HOXD1Q9GZZ0 328 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 ATP13A2Q9NQ11 1180 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 LRP4O75096 1905 aa20.71■□□□□ 0.91
PNKP-201ENST00000322344 SLC22A31A6NKX4 558 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 C12orf71A8MTZ7 269 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 HCN1O60741 890 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 PTNP21246 168 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 RPS5P46782 204 aaKnown RBP20.7■□□□□ 0.9
PNKP-201ENST00000322344 CCR5P51681 352 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 PYDC2Q56P42 97 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 ARMC6Q6NXE6 501 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 GRAMD2AQ8IUY3 354 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 VWA5B2Q8N398 1253 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 KCNN2Q9H2S1 579 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 BABAM2Q9NXR7 383 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 SIGLEC7Q9Y286 467 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 C5orf42Q9H799 3197 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 PRR23D1E9PI22 279 aaPredicted RBP20.7■□□□□ 0.9
PNKP-201ENST00000322344 SGK494L7N484 410 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 CHP2O43745 196 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 OR10H2O60403 315 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 CBX7O95931 251 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 PRR23D2P0DMB1 279 aaPredicted RBP20.7■□□□□ 0.9
PNKP-201ENST00000322344 PRR23CQ6ZRP0 262 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 OR52R1Q8NGF1 315 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 NEDD4LQ96PU5 975 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 LMF2Q9BU23 707 aaKnown RBP20.7■□□□□ 0.9
PNKP-201ENST00000322344 ALG8Q9BVK2 526 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 IFT27Q9BW83 186 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 SEMA6CQ9H3T2 930 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 ADAM30Q9UKF2 790 aa20.7■□□□□ 0.9
PNKP-201ENST00000322344 COL4A2P08572 1712 aa20.69■□□□□ 0.9
PNKP-201ENST00000322344 FANCMQ8IYD8 2048 aa20.69■□□□□ 0.9
PNKP-201ENST00000322344 RNF13O43567 381 aa20.69■□□□□ 0.9
PNKP-201ENST00000322344 RGS9O75916 674 aaPredicted RBP20.69■□□□□ 0.9
PNKP-201ENST00000322344 CD53P19397 219 aa20.69■□□□□ 0.9
PNKP-201ENST00000322344 RBM34P42696 430 aaKnown RBP20.69■□□□□ 0.9
PNKP-201ENST00000322344 FOXK2Q01167 660 aa20.69■□□□□ 0.9
PNKP-201ENST00000322344 ZNHIT3Q15649 155 aaPredicted RBP20.69■□□□□ 0.9
PNKP-201ENST00000322344 ZSWIM7Q19AV6 140 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms