RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 CMC2Q9NRP2 79 aa12.78□□□□□ -0.36
ATG4C-201ENST00000317868 IL20RAQ9UHF4 553 aa12.78□□□□□ -0.36
ATG4C-201ENST00000317868 A0A0B4J2E0 115 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 A0A1B0GX12 115 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 TRAPPC2P0DI81 140 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 TRAPPC2BP0DI82 140 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 PVRP15151 417 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 FUT1P19526 365 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 S1PR1P21453 382 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 CFL1P23528 166 aaKnown RBP12.77□□□□□ -0.36
ATG4C-201ENST00000317868 SHC2P98077 582 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 SCN1BQ07699 218 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 SLC35F1Q5T1Q4 408 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 COX18Q8N8Q8 333 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 SCAIQ8N9R8 606 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 CD180Q99467 661 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 HCAR1Q9BXC0 346 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 RNF32Q9H0A6 362 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 ATP13A2Q9NQ11 1180 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 MEPEQ9NQ76 525 aaPredicted RBP12.77□□□□□ -0.36
ATG4C-201ENST00000317868 TIGARQ9NQ88 270 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 C14orf105Q9NVL8 296 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 TNFRSF10DQ9UBN6 386 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 FBXL21Q9UKT6 434 aa12.77□□□□□ -0.36
ATG4C-201ENST00000317868 TDRD6O60522 2096 aaKnown RBP12.77□□□□□ -0.37
ATG4C-201ENST00000317868 FABP12A6NFH5 140 aa12.77□□□□□ -0.37
ATG4C-201ENST00000317868 LRRC72A6NJI9 287 aa12.77□□□□□ -0.37
ATG4C-201ENST00000317868 AZGP1P25311 298 aaKnown RBP12.77□□□□□ -0.37
ATG4C-201ENST00000317868 AKT2P31751 481 aa12.77□□□□□ -0.37
ATG4C-201ENST00000317868 RNF144AP50876 292 aaPredicted RBP12.77□□□□□ -0.37
ATG4C-201ENST00000317868 RAB38P57729 211 aa12.77□□□□□ -0.37
ATG4C-201ENST00000317868 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.77□□□□□ -0.37
ATG4C-201ENST00000317868 PRPF38BQ5VTL8 546 aaKnown RBP12.77□□□□□ -0.37
ATG4C-201ENST00000317868 THSD4Q6ZMP0 1018 aa12.77□□□□□ -0.37
ATG4C-201ENST00000317868 ZNF517Q6ZMY9 492 aaPredicted RBP12.77□□□□□ -0.37
ATG4C-201ENST00000317868 DGAT2L6Q6ZPD8 337 aa12.77□□□□□ -0.37
ATG4C-201ENST00000317868 Q6ZSR6 202 aa12.77□□□□□ -0.37
ATG4C-201ENST00000317868 ZAR1Q86SH2 424 aa12.77□□□□□ -0.37
ATG4C-201ENST00000317868 LSRQ86X29 649 aaPredicted RBP12.77□□□□□ -0.37
ATG4C-201ENST00000317868 ZNF655Q8N720 491 aaPredicted RBP12.77□□□□□ -0.37
ATG4C-201ENST00000317868 SLC35B4Q969S0 331 aa12.77□□□□□ -0.37
ATG4C-201ENST00000317868 DIRAS2Q96HU8 199 aa12.77□□□□□ -0.37
ATG4C-201ENST00000317868 USP36Q9P275 1121 aaKnown RBP12.77□□□□□ -0.37
ATG4C-201ENST00000317868 TMEM5Q9Y2B1 443 aa12.77□□□□□ -0.37
ATG4C-201ENST00000317868 NPIPA5A0A0B4J1W7 369 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 GXYLT2A0PJZ3 443 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 HTR3EA5X5Y0 456 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 FAM183AA6NL82 134 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 SHISA7A6NL88 538 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 NPIPA7E9PJI5 369 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 PLA2G10O15496 165 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 IGHV4-34P06331 123 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 NPIPA8P0DM63 369 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 GABRG2P18507 467 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 EXOSC7Q15024 291 aaKnown RBP12.76□□□□□ -0.37
ATG4C-201ENST00000317868 PLBD1Q6P4A8 553 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 LINC00114Q6XXX2 140 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 SENP5Q96HI0 755 aaPredicted RBP12.76□□□□□ -0.37
ATG4C-201ENST00000317868 ISG20L2Q9H9L3 353 aaKnown RBP12.76□□□□□ -0.37
ATG4C-201ENST00000317868 MOV10Q9HCE1 1003 aaKnown RBP12.76□□□□□ -0.37
ATG4C-201ENST00000317868 INPP5EQ9NRR6 644 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 SPACA6W5XKT8 324 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 RNF13O43567 381 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 HCRTR1O43613 425 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 FOXS1O43638 330 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 RFPL3O75679 317 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 IGLV3-19P01714 112 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 IFI30P13284 250 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 IL9P15248 144 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 CELP19835 753 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 CAV3P56539 151 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 POU6F2P78424 691 aaPredicted RBP12.76□□□□□ -0.37
ATG4C-201ENST00000317868 ILF3Q12906 894 aaKnown RBP eCLIP12.76□□□□□ -0.37
ATG4C-201ENST00000317868 AMZ1Q400G9 498 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 SMARCD3Q6STE5 483 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 KIAA1324Q6UXG2 1013 aaKnown RBP12.76□□□□□ -0.37
ATG4C-201ENST00000317868 SFTPA2Q8IWL1 248 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 OR13H1Q8NG92 308 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 PTP4A1Q93096 173 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 TP53INP1Q96A56 240 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 ZC3HAV1LQ96H79 300 aaKnown RBP12.76□□□□□ -0.37
ATG4C-201ENST00000317868 AHCYL2Q96HN2 611 aaKnown RBP12.76□□□□□ -0.37
ATG4C-201ENST00000317868 ZNF559Q9BR84 538 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 TCEAL2Q9H3H9 227 aaPredicted RBP12.76□□□□□ -0.37
ATG4C-201ENST00000317868 SIRT4Q9Y6E7 314 aaPredicted RBP12.76□□□□□ -0.37
ATG4C-201ENST00000317868 HEATR5AQ86XA9 2040 aa12.76□□□□□ -0.37
ATG4C-201ENST00000317868 TP53BP1Q12888 1972 aaPredicted RBP12.76□□□□□ -0.37
ATG4C-201ENST00000317868 KIR2DS5A0A0G2JLQ3 304 aa12.75□□□□□ -0.37
ATG4C-201ENST00000317868 A0A0G2JNG1 304 aa12.75□□□□□ -0.37
ATG4C-201ENST00000317868 KIR2DS3K7RE56 304 aa12.75□□□□□ -0.37
ATG4C-201ENST00000317868 CHP2O43745 196 aa12.75□□□□□ -0.37
ATG4C-201ENST00000317868 ADAM11O75078 769 aa12.75□□□□□ -0.37
ATG4C-201ENST00000317868 FAM157BP0CG42 384 aa12.75□□□□□ -0.37
ATG4C-201ENST00000317868 SLC35E2P0CK97 266 aa12.75□□□□□ -0.37
ATG4C-201ENST00000317868 CD53P19397 219 aa12.75□□□□□ -0.37
ATG4C-201ENST00000317868 NT5EP21589 574 aa12.75□□□□□ -0.37
ATG4C-201ENST00000317868 SSTR4P31391 388 aa12.75□□□□□ -0.37
ATG4C-201ENST00000317868 RABIFP47224 123 aa12.75□□□□□ -0.37
ATG4C-201ENST00000317868 PSG6Q00889 435 aa12.75□□□□□ -0.37
ATG4C-201ENST00000317868 FOXK2Q01167 660 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms