RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ANKRD28O15084 1053 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 FBXO45P0C2W1 286 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 PRSS3P35030 304 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 PRKXP51817 358 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 GPR148Q8TDV2 347 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 SLA2Q9H6Q3 261 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 SLC39A1Q9NY26 324 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 HCFC2Q9Y5Z7 792 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 MEGF11A6BM72 1044 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 HMX3A6NHT5 357 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 JUNBP17275 347 aaPredicted RBP12.92□□□□□ -0.34
SPAST-201ENST00000315285 NR0B1P51843 470 aaKnown RBP12.92□□□□□ -0.34
SPAST-201ENST00000315285 PCGF3Q3KNV8 242 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 SLC46A3Q7Z3Q1 461 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 LILRA3Q8N6C8 439 aaPredicted RBP12.92□□□□□ -0.34
SPAST-201ENST00000315285 HAVCR2Q8TDQ0 301 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 ARRDC3Q96B67 414 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 SLC25A18Q9H1K4 315 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 ERVK-19Q9WJR5 959 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 GLI3P10071 1580 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 HIDE1A8MVS5 230 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 CD3GP09693 182 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 HMGA1P17096 107 aaKnown RBP12.92□□□□□ -0.34
SPAST-201ENST00000315285 PSMB10P40306 273 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 ERVK-25P63136 954 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 OR1Q1Q15612 314 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 INPP5EQ9NRR6 644 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 TAS2R16Q9NYV7 291 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 PRELID1Q9Y255 219 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 LOC105369274A0A096LPK9 316 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 SDC3O75056 442 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 PVRP15151 417 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 AFMIDQ63HM1 303 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 OR4N4Q8N0Y3 316 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 ZNF417Q8TAU3 575 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 SLC22A8Q8TCC7 542 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 LPAR4Q99677 370 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 CENPOQ9BU64 300 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 MS4A8Q9BY19 250 aa12.92□□□□□ -0.34
SPAST-201ENST00000315285 KIR2DS5A0A0G2JLQ3 304 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 A0A0G2JNG1 304 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 A6NIN4 97 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 KIR2DS3K7RE56 304 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 GPR75O95800 540 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 KIR2DS5Q14953 304 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 CCSMST1Q4G0I0 132 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 SYT6Q5T7P8 510 aaPredicted RBP12.91□□□□□ -0.34
SPAST-201ENST00000315285 METTL11BQ5VVY1 283 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 FBXO46Q6PJ61 603 aaPredicted RBP12.91□□□□□ -0.34
SPAST-201ENST00000315285 LRRC56Q8IYG6 542 aaPredicted RBP12.91□□□□□ -0.34
SPAST-201ENST00000315285 NEDD4LQ96PU5 975 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 SLC5A7Q9GZV3 580 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 NKX2-4Q9H2Z4 354 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 TNFRSF12AQ9NP84 129 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 NDUFAF4Q9P032 175 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 LOC102723532A0A0G2JNH3 316 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 PRAMEF26H0Y7S4 382 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 H7C2Y5 167 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 RAD51DO75771 328 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 ILKQ13418 452 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 RPE65Q16518 533 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 FAM69BQ5VUD6 431 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 KDM4DQ6B0I6 523 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 NIPSNAP1Q9BPW8 284 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 MRI1Q9BV20 369 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 BTBD2Q9BX70 525 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 QRSL1Q9H0R6 528 aaKnown RBP12.91□□□□□ -0.34
SPAST-201ENST00000315285 NAP1L6A6NFF2 107 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 CACNG3O60359 315 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 PAHP00439 452 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 PBX2P40425 430 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 SLC6A8P48029 635 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 MFSD13AQ14CX5 517 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 RAET1LQ5VY80 246 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 FAM198BQ6UWH4 519 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 NEURL3Q96EH8 262 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 C16orf58Q96GQ5 468 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 OR51J1Q9H342 316 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 PDFQ9HBH1 243 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 SLC35A3Q9Y2D2 325 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 GABRPO00591 440 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 SBK3P0C264 359 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 UBL4AP11441 157 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 CR2P20023 1033 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 DRD1P21728 446 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 GPR19Q15760 415 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 LRRC28Q86X40 367 aaPredicted RBP12.91□□□□□ -0.34
SPAST-201ENST00000315285 CHTF18Q8WVB6 975 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 CNOT9Q92600 299 aaKnown RBP12.91□□□□□ -0.34
SPAST-201ENST00000315285 HOXB13Q92826 284 aaPredicted RBP12.91□□□□□ -0.34
SPAST-201ENST00000315285 SLC25A44Q96H78 314 aaPredicted RBP12.91□□□□□ -0.34
SPAST-201ENST00000315285 TMEM121BQ9BXQ6 578 aaPredicted RBP12.91□□□□□ -0.34
SPAST-201ENST00000315285 KCNN3Q9UGI6 736 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 ADAMTS7Q9UKP4 1686 aa12.91□□□□□ -0.34
SPAST-201ENST00000315285 EEF1E1-BLOC1S5C9J1V9 151 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 FAM227AF5H4B4 570 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 AKR1C4P17516 323 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 KCNJ10P78508 379 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 GARNL3Q5VVW2 1013 aa12.9□□□□□ -0.34
SPAST-201ENST00000315285 NRARPQ7Z6K4 114 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms