RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 POT1Q9NUX5 634 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 C1orf196B1AJZ1 125 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 NPIPA5E9PKD4 350 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 PRSS23O95084 383 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 EGFP01133 1207 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 SIM1P81133 766 aaPredicted RBP18.13■□□□□ 0.49
USP48-201ENST00000308271 PYCR3Q53H96 274 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 OR9A2Q8NGT5 310 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 NPIPA1Q9UND3 350 aa18.13■□□□□ 0.49
USP48-201ENST00000308271 I6L893 689 aaPredicted RBP18.12■□□□□ 0.49
USP48-201ENST00000308271 FCRLBQ6BAA4 426 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 RADILQ96JH8 1075 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 MAFFQ9ULX9 164 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 TSPAN12O95859 305 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 C1SP09871 688 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 CPEP16870 476 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 PCMT1P22061 227 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 NRG3P56975 720 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 VAMP2P63027 116 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 ALKAL2Q6UX46 152 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 DPPA4Q7L190 304 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 SIAH3Q8IW03 269 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 OR4N5Q8IXE1 308 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 TCTE3Q8IZS6 198 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 CDRT4Q8N9R6 151 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 DPYSL5Q9BPU6 564 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 DHRS9Q9BPW9 319 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 SLC35A3Q9Y2D2 325 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 A0A1W2PQ45 241 aaPredicted RBP18.12■□□□□ 0.49
USP48-201ENST00000308271 A0A1W2PQY0 241 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 MEGF11A6BM72 1044 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 CCDC85CA6NKD9 419 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 FARS2O95363 451 aaKnown RBP18.12■□□□□ 0.49
USP48-201ENST00000308271 HTR1FP30939 366 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 CTSOP43234 321 aaPredicted RBP18.12■□□□□ 0.49
USP48-201ENST00000308271 GPR176Q14439 515 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 DUSP7Q16829 419 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 MORN1Q5T089 497 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 LEG1Q6P5S2 330 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 PTOV1Q86YD1 416 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 OR4M1Q8NGD0 313 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 PMEPA1Q969W9 287 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 CNTNAP3BQ96NU0 1288 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 SLC25A18Q9H1K4 315 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 ADAM29Q9UKF5 820 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 CLEC4EQ9ULY5 219 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 CAMK2AQ9UQM7 478 aa18.12■□□□□ 0.49
USP48-201ENST00000308271 SLC9B1P1A6NJY1 282 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 FKTNO75072 461 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 SNRPBP14678 240 aaKnown RBP18.11■□□□□ 0.49
USP48-201ENST00000308271 BAK1Q16611 211 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 DUSP6Q16828 381 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 UBE2NLQ5JXB2 153 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 NKAPLQ5M9Q1 402 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 C8orf82Q6P1X6 216 aaPredicted RBP18.11■□□□□ 0.49
USP48-201ENST00000308271 B3GLCTQ6Y288 498 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 ZNF440Q8IYI8 595 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 OR6F1Q8NGZ6 308 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 GPR148Q8TDV2 347 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 PHB2Q99623 299 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 PNO1Q9NRX1 252 aaKnown RBP18.11■□□□□ 0.49
USP48-201ENST00000308271 PLSCR3Q9NRY6 295 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 FBXL12Q9NXK8 326 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 PRODH2Q9UF12 536 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 VNN2O95498 520 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 RFPL4BQ6ZWI9 263 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 ACOT4Q8N9L9 421 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 SMAP2Q8WU79 429 aaPredicted RBP18.11■□□□□ 0.49
USP48-201ENST00000308271 EPHA6Q9UF33 1036 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 PGAP2Q9UHJ9 254 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 M0R082 166 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 B3GALT4O96024 378 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 PROS1P07225 676 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 SYPP08247 313 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 HCKP08631 526 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 CR2P20023 1033 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 ZNF776Q68DI1 518 aaPredicted RBP18.11■□□□□ 0.49
USP48-201ENST00000308271 VRK2Q86Y07 508 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 ZNF619Q8N2I2 560 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 NPFFR2Q9Y5X5 522 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 EVPLQ92817 2033 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 POM121CA8CG34 1229 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 UBBP0CG47 229 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 UBCP0CG48 685 aaKnown RBP18.11■□□□□ 0.49
USP48-201ENST00000308271 DLSTP36957 453 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 P2RX3P56373 397 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 RPS27AP62979 156 aaKnown RBP18.11■□□□□ 0.49
USP48-201ENST00000308271 UBA52P62987 128 aaKnown RBP18.11■□□□□ 0.49
USP48-201ENST00000308271 PRSS36Q5K4E3 855 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 C1orf189Q5VU69 101 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 FAM71E1Q6IPT2 247 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 IDO2Q6ZQW0 420 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 ANGPTL6Q8NI99 470 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 TRIB2Q92519 343 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 RELTQ969Z4 430 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 OR7D2Q96RA2 312 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 MUTYHQ9UIF7 546 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 COPS3Q9UNS2 423 aa18.11■□□□□ 0.49
USP48-201ENST00000308271 SYT5O00445 386 aa18.1■□□□□ 0.49
USP48-201ENST00000308271 ZNF208O43345 1280 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms