RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 NHSL2Q5HYW2 709 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 RPS26P11Q5JNZ5 115 aaPredicted RBP9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 GKAP1Q5VSY0 366 aaPredicted RBP9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 PRAMEF8Q5VWM4 474 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 PRAMEF7Q5VXH5 474 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 DLEU7Q6UYE1 221 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CHERPQ8IWX8 916 aaKnown RBP9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CMIPQ8IY22 773 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 METTL25Q8N6Q8 603 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 POU5F2Q8N7G0 328 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 NFKBIDQ8NI38 313 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SLC38A5Q8WUX1 472 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 MAL2Q969L2 176 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ZBTB8AQ96BR9 441 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 RCN3Q96D15 328 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CMTM5Q96DZ9 223 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CCDC106Q9BWC9 280 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 UGT2B28Q9BY64 529 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 QRSL1Q9H0R6 528 aaKnown RBP9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ARMC7Q9H6L4 198 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 RUBCNLQ9H714 662 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 MTHFD2LQ9H903 347 aaPredicted RBP9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 PNPLA3Q9NST1 481 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ALKBH4Q9NXW9 302 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 FAM53CQ9NYF3 392 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 STOML1Q9UBI4 398 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 IFT52Q9Y366 437 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 GMEB1Q9Y692 573 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 HIVEP3Q5T1R4 2406 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 POLEQ07864 2286 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 NCOA6Q14686 2063 aaPredicted RBP9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 MED12Q93074 2177 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 A0A0G2JPF8 293 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CENPVL1A0A0U1RR11 272 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 AGAP5A6NIR3 686 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 HNRNPCL2B2RXH8 293 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 HNRNPCL3B7ZW38 293 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 E9PLN8 166 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 H0Y3Z8 333 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 H3BML4 177 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 LINC01387J3KSC0 135 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 HNRNPCL1O60812 293 aaKnown RBP9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SEMA7AO75326 666 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 FAM107AO95990 144 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 NUDT7P0C024 238 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 TFPTP0C1Z6 253 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 HNRNPCL4P0DMR1 293 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 NID1P14543 1247 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 UQCRBP14927 111 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 BMP7P18075 431 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 GPX2P18283 190 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 PGCP20142 388 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ME2P23368 584 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 PTGER4P35408 488 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ADH7P40394 386 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 KCNJ10P78508 379 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CDK6Q00534 326 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ART3Q13508 389 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SCARB2Q14108 478 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 LARS2Q15031 903 aaKnown RBP9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 NDUFAF6Q330K2 333 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 GLYR1Q49A26 553 aaPredicted RBP9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 C1orf185Q5T7R7 199 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 VASNQ6EMK4 673 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 TMEM211Q6ICI0 200 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 REEP3Q6NUK4 255 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ARSKQ6UWY0 536 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 C3P1Q6ZMU1 363 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CHMP1BQ7LBR1 199 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ARPINQ7Z6K5 226 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 HMGN2P46Q86SG4 172 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 KRT73Q86Y46 540 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 DOLPP1Q86YN1 238 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SLC30A8Q8IWU4 369 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 MEIOBQ8N635 442 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 C11orf65Q8NCR3 313 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 OR8J3Q8NGG0 315 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 OR52P1PQ8NH57 321 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 OR5W2Q8NH69 310 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ZNF563Q8TA94 476 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SSC4DQ8WTU2 575 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SMPDL3BQ92485 455 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 RELTQ969Z4 430 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 LRRC58Q96CX6 371 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 LRRC37BQ96QE4 947 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CCT8L2Q96SF2 557 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 TIMP4Q99727 224 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 TREX2Q9BQ50 279 aaPredicted RBP9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 VKORC1Q9BQB6 163 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SPATA5L1Q9BVQ7 753 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SPATA9Q9BWV2 254 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 LAT2Q9GZY6 243 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 TMEM38AQ9H6F2 299 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 MED17Q9NVC6 651 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 KCNE5Q9UJ90 142 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ERRFI1Q9UJM3 462 aaPredicted RBP9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ADAM21Q9UKJ8 722 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ZNF232Q9UNY5 417 aa9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ZNF443Q9Y2A4 671 aaPredicted RBP9.97□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 MEMO1Q9Y316 297 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms