RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 UGT3A2Q3SY77 523 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 TXNDC8Q6A555 127 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 SHDQ96IW2 340 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 UBL7Q96S82 380 aaPredicted RBP12.68□□□□□ -0.38
TRIM56-201ENST00000306085 KIF1AQ12756 1690 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 NAP1L6A6NFF2 107 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 GALTP07902 379 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 NME2P22392 152 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 USF1P22415 310 aaPredicted RBP12.68□□□□□ -0.38
TRIM56-201ENST00000306085 OVCH1Q7RTY7 1134 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 PRR22Q8IZ63 422 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 KATNB1Q9BVA0 655 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 DNAJB5O75953 348 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 TAP2Q03519 686 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 TNK1Q13470 666 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 NSDHLQ15738 373 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 ALKAL2Q6UX46 152 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 FAM109AQ8N4B1 249 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 ZBTB8AQ96BR9 441 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 ZNF582Q96NG8 517 aaPredicted RBP12.68□□□□□ -0.38
TRIM56-201ENST00000306085 KLRC4O43908 158 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 KCNK5O95279 499 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 DEFB134Q4QY38 66 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 CLDND1Q9NY35 253 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 OR2J3O76001 311 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 ARRB1P49407 418 aaPredicted RBP12.67□□□□□ -0.38
TRIM56-201ENST00000306085 CTXN1P60606 82 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 TIGD5Q53EQ6 642 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 HIST2H3AQ71DI3 136 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 OR6F1Q8NGZ6 308 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 NOTCH3Q9UM47 2321 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 TCRBV7S3A2A0A539 114 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 RAB27BO00194 218 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 BET1O15155 118 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 MLF1P58340 268 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 SUMO1P63165 101 aaKnown RBP12.67□□□□□ -0.38
TRIM56-201ENST00000306085 FAM69AQ5T7M9 428 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 ZNF852Q6ZMS4 543 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 TMEM200AQ86VY9 491 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 BRIX1Q8TDN6 353 aaKnown RBP12.67□□□□□ -0.38
TRIM56-201ENST00000306085 HHATLQ9HCP6 504 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 MIA3Q5JRA6 1907 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 EMC8O43402 210 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 GSRP00390 522 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 C18orf63Q68DL7 685 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 ASPGQ86U10 573 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 DCP2Q8IU60 420 aaKnown RBP12.67□□□□□ -0.38
TRIM56-201ENST00000306085 CPXM2Q8N436 756 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 BTF3L4Q96K17 158 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 TSSK2Q96PF2 358 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 RDH14Q9HBH5 336 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 OBP2BQ9NPH6 170 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 FUOMA2VDF0 154 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 ZFP92A6NM28 416 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 DPM1O60762 260 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 CHRM4P08173 479 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 LAP3P28838 519 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 OPRL1P41146 370 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 MS4A15Q8N5U1 240 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 PDE7BQ9NP56 450 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 NIT2Q9NQR4 276 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 GPR34Q9UPC5 381 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 ABCA6Q8N139 1617 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 A6NIN4 97 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 ZNF44P15621 663 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 DDCP20711 480 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 OLIG2Q13516 323 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 TXNDC5Q8NBS9 432 aaKnown RBP12.67□□□□□ -0.38
TRIM56-201ENST00000306085 OR10R2Q8NGX6 335 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 RYDENQ9NUL5 291 aaKnown RBP12.67□□□□□ -0.38
TRIM56-201ENST00000306085 SLIT1O75093 1534 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 ZNF816-ZNF321PA0A0X1KG74 233 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 JUPP14923 745 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 ZNF321PQ8N8H1 164 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 VEGFDO43915 354 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 EPHA4P54764 986 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 TAS2R46P59540 309 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 SLC14A2Q15849 920 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 EOGTQ5NDL2 527 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 GAREM2Q75VX8 874 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 WWTR1Q9GZV5 400 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 ZNF331Q9NQX6 463 aaPredicted RBP12.67□□□□□ -0.38
TRIM56-201ENST00000306085 PRAF2O60831 178 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 SDC3O75056 442 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 CERS5Q8N5B7 392 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 KCNK13Q9HB14 408 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 BARX1Q9HBU1 254 aaPredicted RBP12.67□□□□□ -0.38
TRIM56-201ENST00000306085 C4BPAP04003 597 aaKnown RBP12.67□□□□□ -0.38
TRIM56-201ENST00000306085 OPCMLQ14982 345 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 OR8J3Q8NGG0 315 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 OR5D14Q8NGL3 314 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 PSMF1Q92530 271 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 ARV1Q9H2C2 271 aa12.67□□□□□ -0.38
TRIM56-201ENST00000306085 LOC105369274A0A096LPK9 316 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 TCRBV5S4A2TA0A5A2 114 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 OR4N4Q8N0Y3 316 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 ITPKCQ96DU7 683 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 CHFRQ96EP1 664 aa12.66□□□□□ -0.38
TRIM56-201ENST00000306085 CST3P01034 146 aaPredicted RBP12.66□□□□□ -0.38
TRIM56-201ENST00000306085 DGKZQ13574 1117 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms