RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 KCNAB2Q13303 367 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 DYNC1I2Q13409 638 aaKnown RBP8.61□□□□□ -1.03
PTPRE-202ENST00000306042 SSPNQ14714 243 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 TIGD6Q17RP2 521 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 ISXQ2M1V0 245 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 ODF4Q2M2E3 257 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 PLEKHG7Q6ZR37 379 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 PELI3Q8N2H9 469 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 OR52E2Q8NGJ4 325 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 DPH1Q9BZG8 443 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 LHX9Q9NQ69 397 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 RXFP3Q9NSD7 469 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 OCIAD1Q9NX40 245 aa8.61□□□□□ -1.03
PTPRE-202ENST00000306042 TESQ9UGI8 421 aaKnown RBP8.61□□□□□ -1.03
PTPRE-202ENST00000306042 POLR2HP52434 150 aaKnown RBP8.6□□□□□ -1.03
PTPRE-202ENST00000306042 NUDT6P53370 316 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 SLC26A5P58743 744 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 PPIAP62937 165 aaKnown RBP8.6□□□□□ -1.03
PTPRE-202ENST00000306042 LEG1Q6P5S2 330 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 RASSF6Q6ZTQ3 369 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 TMEM102Q8N9M5 508 aaPredicted RBP8.6□□□□□ -1.03
PTPRE-202ENST00000306042 SLC16A11Q8NCK7 471 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 OR51G2Q8NGK0 314 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 OR4K13Q8NH42 304 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 THAP4Q8WY91 577 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 PGAM5Q96HS1 289 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 CD320Q9NPF0 282 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 TRIM36Q9NQ86 728 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 DNAJC27Q9NZQ0 273 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 LOC100130705A0A1B0GUX0 176 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 IQCMA0A1B0GVH7 501 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 NRG2O14511 850 aaPredicted RBP8.6□□□□□ -1.03
PTPRE-202ENST00000306042 INMTO95050 263 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 TSPAN12O95859 305 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 APLNRP35414 380 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 ZNF528Q3MIS6 628 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 PERM1Q5SV97 790 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 MEDAGQ5VYS4 303 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 MARCH3Q86UD3 253 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 NAXEQ8NCW5 288 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 FGF11Q92914 225 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 PKP2Q99959 881 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 MRPS26Q9BYN8 205 aaKnown RBP8.6□□□□□ -1.03
PTPRE-202ENST00000306042 C2orf42Q9NWW7 574 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 KLHL21Q9UJP4 597 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 C2orf72A6NCS6 295 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 FIGNL2A6NMB9 653 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 TAF4O00268 1085 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 ITGA10O75578 1167 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 OR2J2O76002 312 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 TP53P04637 393 aaPredicted RBP8.6□□□□□ -1.03
PTPRE-202ENST00000306042 MRPL3P09001 348 aaKnown RBP8.6□□□□□ -1.03
PTPRE-202ENST00000306042 ARAFP10398 606 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 IRF2P14316 349 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 TACR3P29371 465 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 RUNX2Q13950 521 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 TMEM53Q6P2H8 277 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 TMPRSS12Q86WS5 348 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 INIPQ9NRY2 104 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 C19orf53Q9UNZ5 99 aaPredicted RBP8.6□□□□□ -1.03
PTPRE-202ENST00000306042 CTSVO60911 334 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 HCKP08631 526 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 CRABP1P29762 137 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 NAA10P41227 235 aaPredicted RBP8.6□□□□□ -1.03
PTPRE-202ENST00000306042 STAT5AP42229 794 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 PPICP45877 212 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 RPS5P46782 204 aaKnown RBP8.6□□□□□ -1.03
PTPRE-202ENST00000306042 SLC35A1P78382 337 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 CRTC2Q53ET0 693 aaPredicted RBP8.6□□□□□ -1.03
PTPRE-202ENST00000306042 BICRALQ6AI39 1079 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 HBMQ6B0K9 141 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 FBXO42Q6P3S6 717 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 C5orf46Q6UWT4 87 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 LINC01555Q8NAE3 123 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 ADAMTS16Q8TE57 1224 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.6□□□□□ -1.03
PTPRE-202ENST00000306042 ZCCHC14Q8WYQ9 949 aaKnown RBP8.6□□□□□ -1.03
PTPRE-202ENST00000306042 NKD1Q969G9 470 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 GPR87Q9BY21 358 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 TSPAN10Q9H1Z9 355 aaPredicted RBP8.6□□□□□ -1.03
PTPRE-202ENST00000306042 MARCH7Q9H992 704 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 CLEC4AQ9UMR7 237 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 ASB1Q9Y576 335 aa8.6□□□□□ -1.03
PTPRE-202ENST00000306042 IGHV5-10-1A0A0J9YXX1 117 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 PDCD5O14737 125 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 SUSD5O60279 629 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 DLGAP3O95886 979 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 ITGA5P08648 1049 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 GCH1P30793 250 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 PPP1CAP62136 330 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 AGERQ15109 404 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 OR1Q1Q15612 314 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 ATP6AP1Q15904 470 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 MOGQ16653 247 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 OVCH1Q7RTY7 1134 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 APLFQ8IW19 511 aaPredicted RBP8.59□□□□□ -1.03
PTPRE-202ENST00000306042 SYT14Q8NB59 555 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 UXS1Q8NBZ7 420 aa8.59□□□□□ -1.03
PTPRE-202ENST00000306042 APOBEC4Q8WW27 367 aaKnown RBP8.59□□□□□ -1.03
PTPRE-202ENST00000306042 ZNF775Q96BV0 537 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms