RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 GLO1Q04760 184 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 P2RY14Q15391 338 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 YIF1BQ5BJH7 314 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 FAM69AQ5T7M9 428 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 ENPP6Q6UWR7 440 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 FAM58AQ8N1B3 248 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 ECHDC3Q96DC8 303 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 ZMYND19Q96E35 227 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 PRR11Q96HE9 360 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 UBL7Q96S82 380 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 FEVQ99581 238 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 ENKD1Q9H0I2 346 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 WDR6Q9NNW5 1121 aaKnown RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 ZDHHC18Q9NUE0 388 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 POLHQ9Y253 713 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 A0A0D9SEW6 157 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 FAM189A1O60320 539 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 PPP1R11O60927 126 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 HOXB5P09067 269 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 CSNK1A1P48729 337 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 CHRNEQ04844 493 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 CATR1Q13166 79 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 POU4F3Q15319 338 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 SLC22A6Q4U2R8 563 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 RTL6Q6ICC9 239 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 FNDC8Q8TC99 324 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 STT3BQ8TCJ2 826 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 MICU1Q9BPX6 476 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 DPH1Q9BZG8 443 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 SLC25A18Q9H1K4 315 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 DZANK1Q9NVP4 752 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 GJD2Q9UKL4 321 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 VDAC3Q9Y277 283 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 NPFFR2Q9Y5X5 522 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 CHD2O14647 1828 aaKnown RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 DPM1O60762 260 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 ANXA7P20073 488 aaKnown RBP9.8□□□□□ -0.84
CLIP1-201ENST00000302528 SERPINA2P20848 420 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 HLCSP50747 726 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 RBPJQ06330 500 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 DOC2AQ14183 400 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 MOB3CQ70IA8 216 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 PSMF1Q92530 271 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 INTS12Q96CB8 462 aaKnown RBP9.8□□□□□ -0.84
CLIP1-201ENST00000302528 NSUN5Q96P11 429 aaKnown RBP9.8□□□□□ -0.84
CLIP1-201ENST00000302528 ZNF317Q96PQ6 595 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-201ENST00000302528 CXXC1Q9P0U4 656 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-201ENST00000302528 TEX264Q9Y6I9 313 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 OR2T1O43869 369 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 SRPX2O60687 465 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-201ENST00000302528 EEDO75530 441 aaKnown RBP9.8□□□□□ -0.84
CLIP1-201ENST00000302528 USP2O75604 605 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-201ENST00000302528 POU3F2P20265 443 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-201ENST00000302528 CNR2P34972 360 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 XCR1P46094 333 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 ATP1B3P54709 279 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 CLDN6P56747 220 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 CXADRP78310 365 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 HHEXQ03014 270 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 GPR17Q13304 367 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 COL9A2Q14055 689 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-201ENST00000302528 CNIH2Q6PI25 160 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 OR56B4Q8NH76 319 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 HAVCR2Q8TDQ0 301 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 CMSS1Q9BQ75 279 aaKnown RBP9.8□□□□□ -0.84
CLIP1-201ENST00000302528 FAM173AQ9BQD7 235 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 SPEF2Q9C093 1822 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 C2orf78A6NCI8 922 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 GABARAPH6UMI1 98 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 GABARAPO95166 117 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 ALDOAP04075 364 aaKnown RBP9.8□□□□□ -0.84
CLIP1-201ENST00000302528 SLC6A8P48029 635 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 SLC11A1P49279 550 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 STK19P49842 368 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-201ENST00000302528 FXNQ16595 210 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 FAM180BQ6P0A1 224 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 FIGLAQ6QHK4 219 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 KLHDC8AQ8IYD2 350 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 ZFAND2BQ8WV99 257 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 LINC01599Q8WXQ3 324 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 OR51J1Q9H342 316 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 FBXO24O75426 580 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 CAPNS1P04632 268 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 ZNF33AQ06730 810 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 SLC14A2Q15849 920 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 C4orf17Q53FE4 359 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 AADACL3Q5VUY0 350 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 RBMS3Q6XE24 437 aaKnown RBP9.8□□□□□ -0.84
CLIP1-201ENST00000302528 TECPR1Q7Z6L1 1165 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 CD163Q86VB7 1156 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 FJX1Q86VR8 437 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 CPNE8Q86YQ8 564 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 CYB561A3Q8NBI2 242 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 OR11L1Q8NGX0 322 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 CMTM2Q8TAZ6 248 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 MIB2Q96AX9 1013 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 CRB3Q9BUF7 120 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 MMP28Q9H239 520 aa9.8□□□□□ -0.84
CLIP1-201ENST00000302528 SEMA6CQ9H3T2 930 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms