RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 NRTNQ99748 197 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 SLC6A17Q9H1V8 727 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 TTYH1Q9H313 450 aaPredicted RBP10.14□□□□□ -0.79
ZNF558-201ENST00000301475 POLMQ9NP87 494 aaPredicted RBP10.14□□□□□ -0.79
ZNF558-201ENST00000301475 NTMQ9P121 344 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 OR2M5A3KFT3 312 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 CDC42EP2O14613 210 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 PGRMC2O15173 223 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 PTP4A3O75365 173 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 LDOC1O95751 146 aaPredicted RBP10.13□□□□□ -0.79
ZNF558-201ENST00000301475 RAB3BP20337 219 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 PPP2R1BP30154 601 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 OR1D2P34982 312 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 GCGRP47871 477 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 PRLHRP49683 370 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 CCR9P51686 369 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 GNA13Q14344 377 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 FAM26DQ5JW98 314 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 NIPAL3Q6P499 406 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 Q6ZNB5 142 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 NRMQ8IXM6 262 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 KRT78Q8N1N4 520 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 FAM98AQ8NCA5 519 aaKnown RBP10.13□□□□□ -0.79
ZNF558-201ENST00000301475 PIGXQ8TBF5 258 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 SMAP2Q8WU79 429 aaPredicted RBP10.13□□□□□ -0.79
ZNF558-201ENST00000301475 SORCS1Q8WY21 1168 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 OSTF1Q92882 214 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 ZG16BQ96DA0 208 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 MRPS24Q96EL2 167 aaKnown RBP10.13□□□□□ -0.79
ZNF558-201ENST00000301475 IL17FQ96PD4 163 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 PELOQ9BRX2 385 aaKnown RBP10.13□□□□□ -0.79
ZNF558-201ENST00000301475 HRASLSQ9HDD0 168 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 EXOSC3Q9NQT5 275 aaKnown RBP10.13□□□□□ -0.79
ZNF558-201ENST00000301475 NANSQ9NR45 359 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 MID1O15344 667 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 ARPC5O15511 151 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 PLPP2O43688 288 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 GSTZ1O43708 216 aaPredicted RBP10.13□□□□□ -0.79
ZNF558-201ENST00000301475 TMPRSS11DO60235 418 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 KCNJ13O60928 360 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 REM1O75628 298 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 SIX6O95475 246 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 THY1P04216 161 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 GIPP09681 153 aaPredicted RBP10.13□□□□□ -0.79
ZNF558-201ENST00000301475 PSMB1P20618 241 aaKnown RBP10.13□□□□□ -0.79
ZNF558-201ENST00000301475 C4BPBP20851 252 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 PAICSP22234 425 aaKnown RBP10.13□□□□□ -0.79
ZNF558-201ENST00000301475 FPR3P25089 353 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 BSGP35613 385 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 TRAM2Q15035 370 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 HENMT1Q5T8I9 393 aaKnown RBP10.13□□□□□ -0.79
ZNF558-201ENST00000301475 METTL11BQ5VVY1 283 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 FAAP20Q6NZ36 180 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 HSD17B13Q7Z5P4 300 aaPredicted RBP10.13□□□□□ -0.79
ZNF558-201ENST00000301475 TMEM150AQ86TG1 271 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 OR10H4Q8NGA5 316 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 KISS1RQ969F8 398 aaPredicted RBP10.13□□□□□ -0.79
ZNF558-201ENST00000301475 SAMD8Q96LT4 415 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 USB1Q9BQ65 265 aaKnown RBP10.13□□□□□ -0.79
ZNF558-201ENST00000301475 SLC6A15Q9H2J7 730 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 SCPEP1Q9HB40 452 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 LHX9Q9NQ69 397 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 ZCCHC3Q9NUD5 404 aaKnown RBP10.13□□□□□ -0.79
ZNF558-201ENST00000301475 MED17Q9NVC6 651 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 HPF1Q9NWY4 346 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 KCNE3Q9Y6H6 103 aa10.13□□□□□ -0.79
ZNF558-201ENST00000301475 LINC01387J3KSC0 135 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 KLF4O43474 513 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 PRAF2O60831 178 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 RP2O75695 350 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 MRPL3P09001 348 aaKnown RBP10.12□□□□□ -0.79
ZNF558-201ENST00000301475 ALPPL2P10696 532 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 S100A11P31949 105 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 IFNGR2P38484 337 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 PITPNAQ00169 270 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 PAQR7Q86WK9 346 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 SPICQ8N5J4 248 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 ARL14EPQ8N8R7 260 aaPredicted RBP10.12□□□□□ -0.79
ZNF558-201ENST00000301475 AMER3Q8N944 861 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 ZNF454Q8N9F8 522 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 FAM71CQ8NEG0 241 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 BBS10Q8TAM1 723 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 LGALS14Q8TCE9 139 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 GLIPR2Q9H4G4 154 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 EVA1AQ9H8M9 152 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 ZNF275Q9NSD4 429 aaPredicted RBP10.12□□□□□ -0.79
ZNF558-201ENST00000301475 H2AFY2Q9P0M6 372 aaPredicted RBP10.12□□□□□ -0.79
ZNF558-201ENST00000301475 ZNF69Q9UC07 566 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 CAMK2AQ9UQM7 478 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 MDC1Q14676 2089 aaKnown RBP10.12□□□□□ -0.79
ZNF558-201ENST00000301475 TCF20Q9UGU0 1960 aaKnown RBP10.12□□□□□ -0.79
ZNF558-201ENST00000301475 DAPL1A0PJW8 107 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 CHURC1-FNTBB4DL54 471 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 EPXP11678 715 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 GABRA1P14867 456 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 ANXA7P20073 488 aaKnown RBP10.12□□□□□ -0.79
ZNF558-201ENST00000301475 CALCRP30988 508 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 PRKAG1P54619 331 aa10.12□□□□□ -0.79
ZNF558-201ENST00000301475 LASP1Q14847 261 aaKnown RBP10.12□□□□□ -0.79
ZNF558-201ENST00000301475 ACSM3Q53FZ2 586 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms