RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 VWA2Q5GFL6 755 aa13.48□□□□□ -0.25
SMG8-201ENST00000300917 SLC36A4Q6YBV0 504 aa13.48□□□□□ -0.25
SMG8-201ENST00000300917 ZNF620Q6ZNG0 422 aa13.48□□□□□ -0.25
SMG8-201ENST00000300917 RASSF6Q6ZTQ3 369 aa13.48□□□□□ -0.25
SMG8-201ENST00000300917 FANK1Q8TC84 345 aa13.48□□□□□ -0.25
SMG8-201ENST00000300917 IFT27Q9BW83 186 aa13.48□□□□□ -0.25
SMG8-201ENST00000300917 CHCHD3Q9NX63 227 aaKnown RBP13.48□□□□□ -0.25
SMG8-201ENST00000300917 SLC35F4A4IF30 521 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 CTDSP2O14595 271 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 OCM2P0CE71 109 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 OCMP0CE72 109 aaPredicted RBP13.47□□□□□ -0.25
SMG8-201ENST00000300917 GTF2E2P29084 291 aaKnown RBP13.47□□□□□ -0.25
SMG8-201ENST00000300917 INSL4Q14641 139 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 USP43Q70EL4 1123 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 ATCAYQ86WG3 371 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 C9orf43Q8TAL5 461 aaPredicted RBP13.47□□□□□ -0.25
SMG8-201ENST00000300917 HCAR1Q9BXC0 346 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 AKIP1Q9NQ31 210 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 HINT3Q9NQE9 182 aaKnown RBP13.47□□□□□ -0.25
SMG8-201ENST00000300917 SIDT1Q9NXL6 827 aaKnown RBP13.47□□□□□ -0.25
SMG8-201ENST00000300917 QPCTLQ9NXS2 382 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 PLCL2Q9UPR0 1127 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 LMO7DNF2Z398 122 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 HRO43593 1189 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 SRPX2O60687 465 aaPredicted RBP13.47□□□□□ -0.25
SMG8-201ENST00000300917 REM1O75628 298 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 RAB36O95755 333 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 ZGLP1P0C6A0 271 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 CLUP10909 449 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 MAGEA8P43361 318 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 NXPH1P58417 271 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 C14orf28Q4W4Y0 310 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 MANEAQ5SRI9 462 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 POMZP3Q6PJE2 187 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 ARHGEF39Q8N4T4 335 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 LINC00471Q8N535 108 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 OR51L1Q8NGJ5 315 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 TP53INP1Q96A56 240 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 MND1Q9BWT6 205 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 CDADC1Q9BWV3 514 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 UBQLN3Q9H347 655 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 H2AFY2Q9P0M6 372 aaPredicted RBP13.47□□□□□ -0.25
SMG8-201ENST00000300917 FBXL4Q9UKA2 621 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 ATXN7L1Q9ULK2 861 aaPredicted RBP13.47□□□□□ -0.25
SMG8-201ENST00000300917 KLK4Q9Y5K2 254 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 CNTRLQ7Z7A1 2325 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 A0A1B0GWA3 101 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 C17orf105B2RV13 164 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 TBX1O43435 398 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 CTNSO60931 367 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 TSPAN19P0C672 248 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 FPR3P25089 353 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 C1DQ13901 141 aaKnown RBP13.47□□□□□ -0.25
SMG8-201ENST00000300917 OCLNQ16625 522 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 PGGHGQ32M88 737 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 RBM12BQ8IXT5 1001 aaKnown RBP13.47□□□□□ -0.25
SMG8-201ENST00000300917 SLC35F3Q8IY50 421 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 SYT14Q8NB59 555 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 TM9SF4Q92544 642 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 BPIFA2Q96DR5 249 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 C1GALT1C1Q96EU7 318 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 MSANTD3Q96H12 275 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 CDX2Q99626 313 aaPredicted RBP13.47□□□□□ -0.25
SMG8-201ENST00000300917 OR10A5Q9H207 317 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 TMEM27Q9HBJ8 222 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 MEPEQ9NQ76 525 aaPredicted RBP13.47□□□□□ -0.25
SMG8-201ENST00000300917 PCDHGA3Q9Y5H0 932 aa13.47□□□□□ -0.25
SMG8-201ENST00000300917 UNC119BA6NIH7 251 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 PLD2O14939 933 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 PRODHO43272 600 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 PIAS2O75928 621 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 FOSL2P15408 326 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 CFHR1Q03591 330 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 NCF4Q15080 339 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 RGS21Q2M5E4 152 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 TMEM201Q5SNT2 666 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 C22orf42Q6IC83 251 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 CD300LDQ6UXZ3 194 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 MFSD4AQ8N468 514 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 NANOGP1Q8N7R0 232 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 OR2T33Q8NG76 320 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 NELL2Q99435 816 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 CD180Q99467 661 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 MESP1Q9BRJ9 268 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 ASPNQ9BXN1 380 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.46□□□□□ -0.25
SMG8-201ENST00000300917 TMEM165Q9HC07 324 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 LINC00854A0A1B0GVQ3 168 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 BCAT2O15382 392 aaPredicted RBP13.46□□□□□ -0.25
SMG8-201ENST00000300917 NKX2-2O95096 273 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 CLEC2LP0C7M8 214 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 BMP7P18075 431 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 DHPSP49366 369 aaPredicted RBP13.46□□□□□ -0.25
SMG8-201ENST00000300917 CAV3P56539 151 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 FXYD6P3P58550 94 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 CRYZQ08257 329 aaKnown RBP13.46□□□□□ -0.25
SMG8-201ENST00000300917 ALG10BQ5I7T1 473 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 SLC25A45Q8N413 288 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 LRRC17Q8N6Y2 441 aa13.46□□□□□ -0.25
SMG8-201ENST00000300917 OSTF1Q92882 214 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms