RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 EXOSC7Q15024 291 aaKnown RBP11.99□□□□□ -0.49
HIF3A-204ENST00000300862 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.99□□□□□ -0.49
HIF3A-204ENST00000300862 VASNQ6EMK4 673 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 ZC3H14Q6PJT7 736 aaKnown RBP11.99□□□□□ -0.49
HIF3A-204ENST00000300862 GJD3Q8N144 294 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 OR2L13Q8N349 312 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 GALNT6Q8NCL4 622 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 UBASH3BQ8TF42 649 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 SENP5Q96HI0 755 aaPredicted RBP11.99□□□□□ -0.49
HIF3A-204ENST00000300862 PBX4Q9BYU1 374 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 TNFRSF10DQ9UBN6 386 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 HEBP2Q9Y5Z4 205 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 SIRT4Q9Y6E7 314 aaPredicted RBP11.99□□□□□ -0.49
HIF3A-204ENST00000300862 CDH10Q9Y6N8 788 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 A0A1W2PQF6 199 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 ZNF780AO75290 641 aaPredicted RBP11.99□□□□□ -0.49
HIF3A-204ENST00000300862 REM1O75628 298 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 OR5F1O95221 314 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 HOXB2P14652 356 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 UGT2B7P16662 529 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 HTR1FP30939 366 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 NTSR1P30989 418 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 KIR2DL3P43628 341 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 SLC16A1P53985 500 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 KLHL12Q53G59 568 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 MRPL2Q5T653 305 aaKnown RBP11.99□□□□□ -0.49
HIF3A-204ENST00000300862 SYCE2Q6PIF2 218 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 CD200R1LQ6Q8B3 271 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 PAMR1Q6UXH9 720 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 CXXC5Q7LFL8 322 aaKnown RBP11.99□□□□□ -0.49
HIF3A-204ENST00000300862 KLHL36Q8N4N3 616 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 ARIH2OSQ8N7S6 290 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 FLVCR1-AS1Q8TAF5 88 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 SUN5Q8TC36 379 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 ZFAND1Q8TCF1 268 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 NECTIN4Q96NY8 510 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 PRSS27Q9BQR3 290 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 MED18Q9BUE0 208 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 OR52D1Q9H346 318 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 RNF121Q9H920 327 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 STARD5Q9NSY2 213 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 DAPP1Q9UN19 280 aa11.99□□□□□ -0.49
HIF3A-204ENST00000300862 TRDV1A0A1B0GX56 115 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 OR6C70A6NIJ9 312 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 C12orf71A8MTZ7 269 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 CPMP14384 443 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 NT5EP21589 574 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 FGF9P31371 208 aaPredicted RBP11.98□□□□□ -0.49
HIF3A-204ENST00000300862 ACSL1P33121 698 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 EEF1A1P68104 462 aaKnown RBP11.98□□□□□ -0.49
HIF3A-204ENST00000300862 SRSF5Q13243 272 aaKnown RBP11.98□□□□□ -0.49
HIF3A-204ENST00000300862 SUZ12Q15022 739 aaKnown RBP11.98□□□□□ -0.49
HIF3A-204ENST00000300862 ARHGAP11BQ3KRB8 267 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 FCRL6Q6DN72 434 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 ZNF322Q6U7Q0 402 aaPredicted RBP11.98□□□□□ -0.49
HIF3A-204ENST00000300862 TMEM99Q8N816 258 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 ANGPTL6Q8NI99 470 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 SCARF2Q96GP6 870 aaPredicted RBP11.98□□□□□ -0.49
HIF3A-204ENST00000300862 CITED4Q96RK1 184 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 TEX12Q9BXU0 123 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 GON7Q9BXV9 100 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 ANKRD19PQ9H560 264 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 CACYBPQ9HB71 228 aaKnown RBP11.98□□□□□ -0.49
HIF3A-204ENST00000300862 NLGN3Q9NZ94 848 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 EPOPA6NHQ4 379 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 B3GALT2O43825 422 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 FGF17O60258 216 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 KLF8O95600 359 aaPredicted RBP11.98□□□□□ -0.49
HIF3A-204ENST00000300862 MRPL3P09001 348 aaKnown RBP11.98□□□□□ -0.49
HIF3A-204ENST00000300862 ATXN8OSP0DMR3 200 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 IFI30P13284 250 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 FAPQ12884 760 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 GPR18Q14330 331 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 EOGTQ5NDL2 527 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 ANKRD54Q6NXT1 300 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 FIGLAQ6QHK4 219 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 THSD4Q6ZMP0 1018 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 ZAR1Q86SH2 424 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 ZNF761Q86XN6 746 aaPredicted RBP11.98□□□□□ -0.49
HIF3A-204ENST00000300862 YIPF7Q8N8F6 280 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 GDPD1Q8N9F7 314 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 AP3S1Q92572 193 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 BMFQ96LC9 184 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 FRMD6Q96NE9 622 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 SMAD5Q99717 465 aaKnown RBP11.98□□□□□ -0.49
HIF3A-204ENST00000300862 ATF6BQ99941 703 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 ISYNA1Q9NPH2 558 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 B3GAT2Q9NPZ5 323 aa11.98□□□□□ -0.49
HIF3A-204ENST00000300862 LOC105371267A0A1B0GV96 52 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 A0A1B0GVC2 190 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 UNC119BA6NIH7 251 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 A6NIN4 97 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 SEC14L5O43304 696 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 AKAP8O43823 692 aaKnown RBP11.97□□□□□ -0.49
HIF3A-204ENST00000300862 KCNJ13O60928 360 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 CLUP10909 449 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 TBXA2RP21731 343 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 LSSP48449 732 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 ARFIP1P53367 373 aa11.97□□□□□ -0.49
HIF3A-204ENST00000300862 IL18Q14116 193 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms