RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 MKS1Q9NXB0 559 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 OR14J1Q9UGF5 321 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 MROH6A6NGR9 719 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 DVL2O14641 736 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PRKYO43930 277 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CHRM4P08173 479 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ARSBP15848 533 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 GNB3P16520 340 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 POU3F2P20265 443 aaPredicted RBP12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 DCTP40126 519 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 TAP2Q03519 686 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 FBXW12Q6X9E4 464 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 MOB3CQ70IA8 216 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PAQR8Q8TEZ7 354 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 TRUB1Q8WWH5 349 aaKnown RBP12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ELF4Q99607 663 aaPredicted RBP12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PINK1Q9BXM7 581 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 RNF32Q9H0A6 362 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SAP130Q9H0E3 1048 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 C8orf33Q9H7E9 229 aaPredicted RBP12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 MEPEQ9NQ76 525 aaPredicted RBP12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 RAB3DO95716 219 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 F13BP05160 661 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CTSAP10619 480 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 AGTR1P30556 359 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PRSS3P35030 304 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 NKAIN2Q5VXU1 208 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 TMEM184AQ6ZMB5 413 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 POC1BQ8TC44 478 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 OR7D2Q96RA2 312 aa12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 QRSL1Q9H0R6 528 aaKnown RBP12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ZNF443Q9Y2A4 671 aaPredicted RBP12.76□□□□□ -0.37
CHRFAM7A-201ENST00000299847 MYH13Q9UKX3 1938 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 LOC105369274A0A096LPK9 316 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CRHBPP24387 322 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 OR1D4P47884 311 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ALDH3B2P48448 385 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PM20D1Q6GTS8 502 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PDZD3Q86UT5 571 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 OR4N4Q8N0Y3 316 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 BBS1Q8NFJ9 593 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ABHD11Q8NFV4 315 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 OR4F15Q8NGB8 312 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ZFP90Q8TF47 636 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ATOH1Q92858 354 aaPredicted RBP12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 BIRC8Q96P09 236 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CCDC32Q9BV29 185 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PBDC1Q9BVG4 233 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 FAM234AQ9H0X4 552 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 HEMK1Q9Y5R4 338 aaPredicted RBP12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 POM121CA8CG34 1229 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PRKRAO75569 313 aaKnown RBP12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 GPX3P22352 226 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 GCH1P30793 250 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 RAB5BP61020 215 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ABHD12BQ7Z5M8 362 aaPredicted RBP12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SLC6A16Q9GZN6 736 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 HHLA1C9JL84 531 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 G3V3Y1 287 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 LRRTM2O43300 516 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 LILRB5O75023 590 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SC5DO75845 299 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PAHP00439 452 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SLC10A3P09131 477 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 IVDP26440 423 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CCR7P32248 378 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 RAB33AQ14088 237 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ZNF679Q8IYX0 411 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 NANOS1Q8WY41 292 aaKnown RBP12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PIGCQ92535 297 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CASD1Q96PB1 797 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 INTS6Q9UL03 887 aaKnown RBP12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PCGF2P35227 344 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CX3CR1P49238 355 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PODNL1Q6PEZ8 512 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 B3GLCTQ6Y288 498 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 B3GNT8Q7Z7M8 397 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 KDM1BQ8NB78 822 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 OR9A4Q8NGU2 314 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 OR2T35Q8NGX2 323 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CNTNAP3BQ96NU0 1288 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ZNF334Q9HCZ1 680 aaPredicted RBP12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ACOT13Q9NPJ3 140 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SLAMF8Q9P0V8 285 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 MYH11P35749 1972 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PRSS38A1L453 326 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 GJE1A6NN92 205 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 TIMP1P01033 207 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 TIMP2P16035 220 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 TMEM11P17152 192 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PRPS1P60891 318 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 BDH1Q02338 343 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 LEXMQ3ZCV2 418 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ACSM3Q53FZ2 586 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 TCTE1Q5JU00 501 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 OR8J2Q8NGG1 315 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SFXN5Q8TD22 340 aa12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SAT2Q96F10 170 aaPredicted RBP12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 THAP7Q9BT49 309 aaPredicted RBP12.75□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SLC2A11Q9BYW1 496 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms