RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 OR10G6Q8NH81 332 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 SPRYD4Q8WW59 207 aaPredicted RBP12.55□□□□□ -0.4
CTDP1-202ENST00000299543 CDS1Q92903 461 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 TEX12Q9BXU0 123 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 OR51V1Q9H2C8 321 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 SLC38A1Q9H2H9 487 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 PRDM7Q9NQW5 492 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 TESQ9UGI8 421 aaKnown RBP12.55□□□□□ -0.4
CTDP1-202ENST00000299543 PRKAG2Q9UGJ0 569 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 APOBEC3BQ9UH17 382 aaKnown RBP12.55□□□□□ -0.4
CTDP1-202ENST00000299543 BAIAP2Q9UQB8 552 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 CA5BQ9Y2D0 317 aa12.55□□□□□ -0.4
CTDP1-202ENST00000299543 EMC8O43402 210 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 AKAP8O43823 692 aaKnown RBP12.54□□□□□ -0.4
CTDP1-202ENST00000299543 KDM4BO94953 1096 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 GLAP06280 429 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 HNRNPA1P09651 372 aaKnown RBP eCLIP12.54□□□□□ -0.4
CTDP1-202ENST00000299543 SLC1A3P43003 542 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 FGL2Q14314 439 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 FCN2Q15485 313 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 DNAJC5GQ8N7S2 189 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 OR8K3Q8NH51 312 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 LCN9Q8WX39 176 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 MED28Q9H204 178 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 ZSCAN32Q9NX65 697 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 ASB4Q9Y574 426 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 STON1Q9Y6Q2 735 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 CACNA1IQ9P0X4 2223 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 RPS10-NUDT3A0A1W2PQS6 291 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 LINC00862A6NCI5 91 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 NDUFA2O43678 99 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 REM1O75628 298 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 MRPL3P09001 348 aaKnown RBP12.54□□□□□ -0.4
CTDP1-202ENST00000299543 PAICSP22234 425 aaKnown RBP12.54□□□□□ -0.4
CTDP1-202ENST00000299543 HTRA4P83105 476 aaPredicted RBP12.54□□□□□ -0.4
CTDP1-202ENST00000299543 RAB40BQ12829 278 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 IDNKQ5T6J7 187 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 PLBD1Q6P4A8 553 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 TRILQ7L0X0 811 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 YAF2Q8IY57 180 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 OR56A1Q8NGH5 318 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 OR4Q3Q8NH05 313 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 SMARCD2Q92925 531 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 ELP4Q96EB1 424 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 PINK1Q9BXM7 581 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 SLC7A7Q9UM01 511 aa12.54□□□□□ -0.4
CTDP1-202ENST00000299543 MTCL1Q9Y4B5 1905 aaKnown RBP12.54□□□□□ -0.4
CTDP1-202ENST00000299543 A0A1W2PQU0 124 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 MPC2O95563 127 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 FRKP42685 505 aaPredicted RBP12.53□□□□□ -0.4
CTDP1-202ENST00000299543 MAP2K3P46734 347 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 SNRPNP63162 240 aaKnown RBP12.53□□□□□ -0.4
CTDP1-202ENST00000299543 LCN1P1Q5VSP4 162 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 XKRXQ6PP77 449 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 IL20RBQ6UXL0 311 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 SHISA5Q8N114 240 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 OR2L5Q8NG80 312 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 OR2L3Q8NG85 312 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 SLC35A4Q96G79 324 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 ASB16Q96NS5 453 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 DPH1Q9BZG8 443 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 NKIRAS2Q9NYR9 191 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 ELF5Q9UKW6 265 aaPredicted RBP12.53□□□□□ -0.4
CTDP1-202ENST00000299543 WDR45Q9Y484 360 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 REV3LO60673 3130 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 IQCMA0A1B0GVH7 501 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 TCRBV16S1A1N1A0A5B0 115 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 GCGRP47871 477 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 CTBP2P56545 445 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 CSTF1Q05048 431 aaKnown RBP12.53□□□□□ -0.4
CTDP1-202ENST00000299543 TSPAN31Q12999 210 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 DSG2Q14126 1118 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 GAB4Q2WGN9 574 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 C3orf38Q5JPI3 329 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 ATRAIDQ6UW56 229 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 LUZP2Q86TE4 346 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 TMEM151BQ8IW70 566 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 STPG2Q8N412 459 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 BEST4Q8NFU0 473 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 AP3S1Q92572 193 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 NARS2Q96I59 477 aaKnown RBP12.53□□□□□ -0.4
CTDP1-202ENST00000299543 FUZQ9BT04 418 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 CHIAQ9BZP6 476 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 KLHL1Q9NR64 748 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 TNFRSF10DQ9UBN6 386 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 TRAPPC4Q9Y296 219 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 HRH3Q9Y5N1 445 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 ZNF98A6NK75 572 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 CHURC1-FNTBB4DL54 471 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 INMT-MINDY4F8WBC2 141 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 APOC3P02656 99 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 ZNF888P0CJ79 500 aaPredicted RBP12.53□□□□□ -0.4
CTDP1-202ENST00000299543 ARSBP15848 533 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 CPN2P22792 545 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 GJA4P35212 333 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 BCL2L15Q5TBC7 163 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 AGBL4Q5VU57 503 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 FAM111BQ6SJ93 734 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 OR10H4Q8NGA5 316 aa12.53□□□□□ -0.4
CTDP1-202ENST00000299543 SLC41A3Q96GZ6 507 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms