RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 ARHGAP11BQ3KRB8 267 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 CYBRD1Q53TN4 286 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 AP1ARQ63HQ0 302 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 CD163Q86VB7 1156 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 ARMC8Q8IUR7 673 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 DMRTC2Q8IXT2 367 aaPredicted RBP19.26■□□□□ 0.67
SMCO4-201ENST00000298966 SHISA5Q8N114 240 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 OR5D16Q8NGK9 328 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 LILRB4Q8NHJ6 448 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 FBXO30Q8TB52 745 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 FAM57AQ8TBR7 257 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 LRTOMTQ8WZ04 291 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 SLC47A1Q96FL8 570 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 C16orf58Q96GQ5 468 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 DOHHQ9BU89 302 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 KLHL4Q9C0H6 718 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 CACYBPQ9HB71 228 aaKnown RBP19.26■□□□□ 0.67
SMCO4-201ENST00000298966 KCNJ16Q9NPI9 418 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 EQTNQ9NQ60 294 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 BAG5Q9UL15 447 aa19.26■□□□□ 0.67
SMCO4-201ENST00000298966 NKX2-6A6NCS4 301 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 OR6C76A6NM76 312 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 CDK2AP1O14519 115 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 NME2P1O60361 137 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 SLC25A12O75746 678 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 PRKD3O94806 890 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 KLK2P20151 261 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 NME2P22392 152 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 PEX2P28328 305 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 PTGER1P34995 402 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 DCAF7P61962 342 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 ZNF155Q12901 538 aaPredicted RBP19.25■□□□□ 0.67
SMCO4-201ENST00000298966 MYBPHQ13203 477 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 ATP6AP1Q15904 470 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 RNFT1Q5M7Z0 435 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 PAPD4Q6PIY7 484 aaKnown RBP19.25■□□□□ 0.67
SMCO4-201ENST00000298966 ENPP6Q6UWR7 440 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 ANKFN1Q8N957 763 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 PTPMT1Q8WUK0 201 aaPredicted RBP19.25■□□□□ 0.67
SMCO4-201ENST00000298966 OIT3Q8WWZ8 545 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 SLC9A6Q92581 669 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 NRGNQ92686 78 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 TSLPQ969D9 159 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 CENPNQ96H22 339 aaPredicted RBP19.25■□□□□ 0.67
SMCO4-201ENST00000298966 SEPHS2Q99611 448 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 LPAR4Q99677 370 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 TACO1Q9BSH4 297 aaKnown RBP19.25■□□□□ 0.67
SMCO4-201ENST00000298966 CNPPD1Q9BV87 410 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 CHID1Q9BWS9 393 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 OR10A5Q9H207 317 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 CXXC4Q9H2H0 198 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 FOLH1BQ9HBA9 442 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 SLC24A3Q9HC58 644 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 PNO1Q9NRX1 252 aaKnown RBP19.25■□□□□ 0.67
SMCO4-201ENST00000298966 COPS7AQ9UBW8 275 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 ERVK-19Q9WJR5 959 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 RNF6Q9Y252 685 aa19.25■□□□□ 0.67
SMCO4-201ENST00000298966 M0QX08 132 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 DEAF1O75398 565 aaPredicted RBP19.24■□□□□ 0.67
SMCO4-201ENST00000298966 ZNF682O95780 498 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 ACP2P11117 423 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 MSX1P28360 303 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 EMDP50402 254 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 GPAT3Q53EU6 434 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 SFT2D3Q587I9 215 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 HMBOX1Q6NT76 420 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 DGAT2L6Q6ZPD8 337 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 FAM86B1Q8N7N1 296 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 ZNF615Q8N8J6 731 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 COX18Q8N8Q8 333 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 POGLUT1Q8NBL1 392 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 SLC16A11Q8NCK7 471 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 SLC35A4Q96G79 324 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 VSTM2LQ96N03 204 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 UCK2Q9BZX2 261 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 CDCP1Q9H5V8 836 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 C8orf4Q9NR00 106 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 RYDENQ9NUL5 291 aaKnown RBP19.24■□□□□ 0.67
SMCO4-201ENST00000298966 CNOT11Q9UKZ1 510 aaKnown RBP19.24■□□□□ 0.67
SMCO4-201ENST00000298966 C15orf41Q9Y2V0 281 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 LRRC42Q9Y546 428 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 GPC6Q9Y625 555 aaPredicted RBP19.24■□□□□ 0.67
SMCO4-201ENST00000298966 DSPPQ9NZW4 1301 aa19.24■□□□□ 0.67
SMCO4-201ENST00000298966 A0A1B0GTH9 108 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 TFECO14948 347 aaPredicted RBP19.23■□□□□ 0.67
SMCO4-201ENST00000298966 GCM2O75603 506 aaPredicted RBP19.23■□□□□ 0.67
SMCO4-201ENST00000298966 TOXO94900 526 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 IGKV3-11P04433 115 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 HOXD4P09016 255 aaPredicted RBP19.23■□□□□ 0.67
SMCO4-201ENST00000298966 TRHRP34981 398 aaPredicted RBP19.23■□□□□ 0.67
SMCO4-201ENST00000298966 MAGEA2P43356 314 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 POU6F2P78424 691 aaPredicted RBP19.23■□□□□ 0.67
SMCO4-201ENST00000298966 TFF3Q07654 80 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 EXOSC7Q15024 291 aaKnown RBP19.23■□□□□ 0.67
SMCO4-201ENST00000298966 MAPK11Q15759 364 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 DUSP5Q16690 384 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 IFI44LQ53G44 452 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 LPCAT4Q643R3 524 aa19.23■□□□□ 0.67
SMCO4-201ENST00000298966 PIWIL3Q7Z3Z3 882 aaKnown RBP19.23■□□□□ 0.67
SMCO4-201ENST00000298966 RPS19BP1Q86WX3 136 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms