RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 MFSD9Q8NBP5 474 aa12.58□□□□□ -0.4
TTC39B-201ENST00000297615 OR52R1Q8NGF1 315 aa12.58□□□□□ -0.4
TTC39B-201ENST00000297615 OR4Q3Q8NH05 313 aa12.58□□□□□ -0.4
TTC39B-201ENST00000297615 PIGXQ8TBF5 258 aa12.58□□□□□ -0.4
TTC39B-201ENST00000297615 ENKURQ8TC29 256 aa12.58□□□□□ -0.4
TTC39B-201ENST00000297615 SPRYD4Q8WW59 207 aaPredicted RBP12.58□□□□□ -0.4
TTC39B-201ENST00000297615 UFD1Q92890 307 aa12.58□□□□□ -0.4
TTC39B-201ENST00000297615 MMABQ96EY8 250 aaPredicted RBP12.58□□□□□ -0.4
TTC39B-201ENST00000297615 SLC41A3Q96GZ6 507 aa12.58□□□□□ -0.4
TTC39B-201ENST00000297615 ZNF681Q96N22 645 aa12.58□□□□□ -0.4
TTC39B-201ENST00000297615 AGAP4Q96P64 663 aa12.58□□□□□ -0.4
TTC39B-201ENST00000297615 SPATA5L1Q9BVQ7 753 aa12.58□□□□□ -0.4
TTC39B-201ENST00000297615 CACYBPQ9HB71 228 aaKnown RBP12.58□□□□□ -0.4
TTC39B-201ENST00000297615 ANKHQ9HCJ1 492 aa12.58□□□□□ -0.4
TTC39B-201ENST00000297615 RANGRFQ9HD47 186 aaPredicted RBP12.58□□□□□ -0.4
TTC39B-201ENST00000297615 ACSS1Q9NUB1 689 aaPredicted RBP12.58□□□□□ -0.4
TTC39B-201ENST00000297615 NDUFB11Q9NX14 153 aa12.58□□□□□ -0.4
TTC39B-201ENST00000297615 DAPP1Q9UN19 280 aa12.58□□□□□ -0.4
TTC39B-201ENST00000297615 HEATR5AQ86XA9 2040 aa12.58□□□□□ -0.4
TTC39B-201ENST00000297615 CCDC182A6NF36 153 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 SMLR1H3BR10 107 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 IFNA8P32881 189 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 ACVR1BP36896 505 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 HSD17B2P37059 387 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 RPS27P42677 84 aaKnown RBP12.57□□□□□ -0.4
TTC39B-201ENST00000297615 MAGEA8P43361 318 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 RFX2P48378 723 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 IDNKQ5T6J7 187 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 OR5M10Q6IEU7 315 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 SLC36A4Q6YBV0 504 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 GDF7Q7Z4P5 450 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 ZNF486Q96H40 463 aaPredicted RBP12.57□□□□□ -0.4
TTC39B-201ENST00000297615 NKX3-1Q99801 234 aaPredicted RBP12.57□□□□□ -0.4
TTC39B-201ENST00000297615 ZFYVE21Q9BQ24 234 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 KATNB1Q9BVA0 655 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 MIXL1Q9H2W2 232 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 N6AMT1Q9Y5N5 214 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 MPDZO75970 2070 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 RP1L1Q8IWN7 2480 aaPredicted RBP12.57□□□□□ -0.4
TTC39B-201ENST00000297615 UBXN7O94888 489 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 AKT2P31751 481 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 CTBP2P56545 445 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 SUZ12Q15022 739 aaKnown RBP12.57□□□□□ -0.4
TTC39B-201ENST00000297615 SMAD2Q15796 467 aaKnown RBP12.57□□□□□ -0.4
TTC39B-201ENST00000297615 DDI2Q5TDH0 399 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 ZNF425Q6IV72 752 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 MFSD12Q6NUT3 480 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 BHLHB9Q6PI77 547 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 ARL9Q6T311 187 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 ZNF836Q6ZNA1 936 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 RNF44Q7L0R7 432 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 SCAIQ8N9R8 606 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 NEIL3Q8TAT5 605 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 ITPKCQ96DU7 683 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 TXNDC15Q96J42 360 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 WACQ9BTA9 647 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 POLDIP3Q9BY77 421 aaKnown RBP12.57□□□□□ -0.4
TTC39B-201ENST00000297615 NXF2Q9GZY0 626 aaKnown RBP12.57□□□□□ -0.4
TTC39B-201ENST00000297615 HOXD1Q9GZZ0 328 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 DZANK1Q9NVP4 752 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 PAQR5Q9NXK6 330 aaPredicted RBP12.57□□□□□ -0.4
TTC39B-201ENST00000297615 OR6C2Q9NZP2 312 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 CACNA1GO43497 2377 aa12.57□□□□□ -0.4
TTC39B-201ENST00000297615 MEIOCA2RUB1 952 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 C2orf72A6NCS6 295 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 ANKRD61A6NGH8 418 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 LIMS3P0CW19 117 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 LIMS4P0CW20 117 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 SCN1BQ07699 218 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 SLC3A1Q07837 685 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 MLLT11Q13015 90 aaPredicted RBP12.56□□□□□ -0.4
TTC39B-201ENST00000297615 TRAM2Q15035 370 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 TRIQKQ629K1 86 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 FRRS1Q6ZNA5 592 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 C16orf47Q6ZP98 133 aaPredicted RBP12.56□□□□□ -0.4
TTC39B-201ENST00000297615 TMEM163Q8TC26 289 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 DACT3Q96B18 629 aaPredicted RBP12.56□□□□□ -0.4
TTC39B-201ENST00000297615 GAL3ST4Q96RP7 486 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 KLHDC3Q9BQ90 382 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 IFT27Q9BW83 186 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 PNO1Q9NRX1 252 aaKnown RBP12.56□□□□□ -0.4
TTC39B-201ENST00000297615 NLKQ9UBE8 527 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 ZNF232Q9UNY5 417 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 OR10H1Q9Y4A9 318 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 KIAA1549LQ6ZVL6 1849 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 PRODHO43272 600 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 PAICSP22234 425 aaKnown RBP12.56□□□□□ -0.4
TTC39B-201ENST00000297615 NAA10P41227 235 aaPredicted RBP12.56□□□□□ -0.4
TTC39B-201ENST00000297615 CDC20Q12834 499 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 FAM53BQ14153 422 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 MEDAGQ5VYS4 303 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 CNIH2Q6PI25 160 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 TSSK4Q6SA08 328 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 LINC00299Q6ZSB3 139 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 ZNF321PQ8N8H1 164 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 C19orf18Q8NEA5 215 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 PMEPA1Q969W9 287 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 RBM18Q96H35 190 aaKnown RBP12.56□□□□□ -0.4
TTC39B-201ENST00000297615 DEPDC7Q96QD5 511 aa12.56□□□□□ -0.4
TTC39B-201ENST00000297615 SDF2Q99470 211 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms