RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ZNF318Q5VUA4 2279 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 MYO15AQ9UKN7 3530 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 A0A087WUU8 490 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 IDSB3KWA1 339 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 BCAS1O75363 584 aaPredicted RBP14.34□□□□□ -0.11
LSM6-201ENST00000296581 NAT2P11245 290 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 UBL4AP11441 157 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 PRG2P13727 222 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 CRHBPP24387 322 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 FGFBP1Q14512 234 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 EBPQ15125 230 aaKnown RBP14.34□□□□□ -0.11
LSM6-201ENST00000296581 SF3A2Q15428 464 aaKnown RBP14.34□□□□□ -0.11
LSM6-201ENST00000296581 C1orf94Q6P1W5 598 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 Q6ZPB1 254 aaPredicted RBP14.34□□□□□ -0.11
LSM6-201ENST00000296581 GDF7Q7Z4P5 450 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 ZER1Q7Z7L7 766 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 OIT3Q8WWZ8 545 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 HPS1Q92902 700 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 ZNF566Q969W8 418 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 SLC41A3Q96GZ6 507 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 LCORQ96JN0 433 aaPredicted RBP14.34□□□□□ -0.11
LSM6-201ENST00000296581 TESQ9UGI8 421 aaKnown RBP14.34□□□□□ -0.11
LSM6-201ENST00000296581 POU2F3Q9UKI9 436 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 OR6C76A6NM76 312 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 J3QRK9 145 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 MEN1O00255 615 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 GDF9O60383 454 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 HEXBP07686 556 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 CCL4P13236 92 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 OSMP13725 252 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 HTR2AP28223 471 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 GPR143P51810 404 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 CRISP1P54107 249 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 MAD2L1BPQ15013 274 aaPredicted RBP14.34□□□□□ -0.11
LSM6-201ENST00000296581 DECR1Q16698 335 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 TRIM16LQ309B1 348 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 GPR141Q7Z602 305 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 ANKRD37Q7Z713 158 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 C9orf40Q8IXQ3 194 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 CMIPQ8IY22 773 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 LILRB4Q8NHJ6 448 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 LRFN5Q96NI6 719 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 COPS7AQ9UBW8 275 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 B3GNT3Q9Y2A9 372 aa14.34□□□□□ -0.11
LSM6-201ENST00000296581 ALOX12BO75342 701 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 ATE1O95260 518 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 IL33O95760 270 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 CYC1P08574 325 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 GKN3PP0CG01 181 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 AGXTP21549 392 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 MMP11P24347 488 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 BMXP51813 675 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 FOXL2P58012 376 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 COX10Q12887 443 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 TARDBPQ13148 414 aaKnown RBP eCLIP14.33□□□□□ -0.12
LSM6-201ENST00000296581 ILKQ13418 452 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 MOGQ16653 247 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 SIGIRRQ6IA17 410 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 LCN10Q6JVE6 187 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 MRPL14Q6P1L8 145 aaKnown RBP14.33□□□□□ -0.12
LSM6-201ENST00000296581 USP43Q70EL4 1123 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 NAXDQ8IW45 347 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 SPERTQ8NA61 448 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 CNIH3Q8TBE1 160 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 ACOT11Q8WXI4 607 aaPredicted RBP14.33□□□□□ -0.12
LSM6-201ENST00000296581 CNOT9Q92600 299 aaKnown RBP14.33□□□□□ -0.12
LSM6-201ENST00000296581 LMF1Q96S06 567 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 SPSB2Q99619 263 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 DNAJB12Q9NXW2 375 aaKnown RBP14.33□□□□□ -0.12
LSM6-201ENST00000296581 DMDP11532 3685 aa14.33□□□□□ -0.12
LSM6-201ENST00000296581 C2orf92A0A1B0GVN3 265 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 TRAPPC13A5PLN9 417 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 ZAR1LA6NP61 321 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 B4E171 279 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 TO15178 435 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 CCDC159P0C7I6 412 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 ZNF28P17035 718 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 CHMP24386 653 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 TSPAN7P41732 249 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 RNF144AP50876 292 aaPredicted RBP14.32□□□□□ -0.12
LSM6-201ENST00000296581 GABARAPL2P60520 117 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 CXCR4P61073 352 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 LSM11P83369 360 aaKnown RBP eCLIP14.32□□□□□ -0.12
LSM6-201ENST00000296581 PTGES3Q15185 160 aaKnown RBP14.32□□□□□ -0.12
LSM6-201ENST00000296581 OR1Q1Q15612 314 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 NKAIN4Q8IVV8 208 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 ENTHD1Q8IYW4 607 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 CADM3Q8N126 398 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 SUMF1Q8NBK3 374 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 ADNPQ9H2P0 1102 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 PPIEQ9UNP9 301 aaKnown RBP14.32□□□□□ -0.12
LSM6-201ENST00000296581 SLC1A7O00341 560 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 PRKNO60260 465 aaPredicted RBP14.32□□□□□ -0.12
LSM6-201ENST00000296581 LYPD3O95274 346 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 TP53P04637 393 aaPredicted RBP14.32□□□□□ -0.12
LSM6-201ENST00000296581 IFNGR2P38484 337 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 ALDH6A1Q02252 535 aaKnown RBP14.32□□□□□ -0.12
LSM6-201ENST00000296581 ZNF614Q8N883 585 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 ZNF441Q8N8Z8 693 aa14.32□□□□□ -0.12
LSM6-201ENST00000296581 NFAM1Q8NET5 270 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms