RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 MFSD12Q6NUT3 480 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 COMMD7Q86VX2 200 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 ABHD11Q8NFV4 315 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 SGPP1Q9BX95 441 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 GPR62Q9BZJ7 368 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 ZDHHC2Q9UIJ5 367 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 PCDHA9Q9Y5H5 950 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 TSPAN11A1L157 253 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 C17orf112F2Z3M2 114 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 LDB3O75112 727 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 ZP2Q05996 745 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 TRAM1Q15629 374 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 MSMO1Q15800 293 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 SLC22A25Q6T423 547 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 SLC35G3Q8N808 338 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 SDR9C7Q8NEX9 313 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 OR8U1Q8NH10 309 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 SECTM1Q8WVN6 248 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 ZMYND19Q96E35 227 aaPredicted RBP11.74□□□□□ -0.53
SLX4-201ENST00000294008 NTPCRQ9BSD7 190 aaKnown RBP11.74□□□□□ -0.53
SLX4-201ENST00000294008 HRH4Q9H3N8 390 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 OCEL1Q9H607 264 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 FAM120CQ9NX05 1096 aaKnown RBP11.74□□□□□ -0.53
SLX4-201ENST00000294008 RNF150Q9ULK6 438 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 A0A1W2PS29 197 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 ANHXE9PGG2 379 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 SLITRK5O94991 958 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 PLA1AQ53H76 456 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 DPH2Q9BQC3 489 aaPredicted RBP11.73□□□□□ -0.53
SLX4-201ENST00000294008 DPH1Q9BZG8 443 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 MAF1Q9H063 256 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 A0A0A6YYC8 382 aaPredicted RBP11.73□□□□□ -0.53
SLX4-201ENST00000294008 C1orf226A1L170 272 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 A8MT66 165 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 I3L1I5 382 aaPredicted RBP11.73□□□□□ -0.53
SLX4-201ENST00000294008 FADS1O60427 444 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 PTGER1P34995 402 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 MS4A13Q5J8X5 152 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 CTSL3PQ5NE16 218 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 SYT13Q7L8C5 426 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 CYB561A3Q8NBI2 242 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 FKBP10Q96AY3 582 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 QPCTLQ9NXS2 382 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 WTIPA6NIX2 430 aaPredicted RBP11.73□□□□□ -0.53
SLX4-201ENST00000294008 PHYHO14832 338 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 ARPC5O15511 151 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 ADAM23O75077 832 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 SORBS2O94875 1100 aaKnown RBP11.73□□□□□ -0.53
SLX4-201ENST00000294008 PIPP12273 146 aaPredicted RBP11.73□□□□□ -0.53
SLX4-201ENST00000294008 ARL2P36404 184 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 POU4F2Q12837 409 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.73□□□□□ -0.53
SLX4-201ENST00000294008 LIPIQ6XZB0 460 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 GDPD3Q7L5L3 318 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 PDZD9Q8IXQ8 264 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 SMIM12Q96EX1 92 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 CMTM3Q96MX0 182 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 PKP2Q99959 881 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 ULBP2Q9BZM5 246 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 DTLQ9NZJ0 730 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 ARL2-SNX15V9GYD0 113 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 DNPH1O43598 174 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 RDH16O75452 317 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 HSD17B11Q8NBQ5 300 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 OR1J4Q8NGS1 313 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 IL25Q9H293 177 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 MVB12BQ9H7P6 319 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 NKX1-2Q9UD57 310 aaPredicted RBP11.73□□□□□ -0.53
SLX4-201ENST00000294008 SLC7A7Q9UM01 511 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 SLC6A14Q9UN76 642 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 LRP5LA4QPB2 252 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 HCRTO43612 131 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 OR7C1O76099 320 aaPredicted RBP11.73□□□□□ -0.53
SLX4-201ENST00000294008 MMP8P22894 467 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 MSS51Q4VC12 460 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 YIF1BQ5BJH7 314 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 HACD4Q5VWC8 232 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 ZNF704Q6ZNC4 412 aaPredicted RBP11.73□□□□□ -0.53
SLX4-201ENST00000294008 OR5P2Q8WZ92 322 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 TFAP2BQ92481 460 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 SLC39A9Q9NUM3 307 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 CHRNA9Q9UGM1 479 aa11.73□□□□□ -0.53
SLX4-201ENST00000294008 NCBP2LA6PVI3 153 aaKnown RBP11.72□□□□□ -0.53
SLX4-201ENST00000294008 IGHV3-9P01782 118 aa11.72□□□□□ -0.53
SLX4-201ENST00000294008 TMEM41BQ5BJD5 291 aa11.72□□□□□ -0.53
SLX4-201ENST00000294008 ZNF440Q8IYI8 595 aa11.72□□□□□ -0.53
SLX4-201ENST00000294008 DEFB108BQ8NET1 73 aa11.72□□□□□ -0.53
SLX4-201ENST00000294008 TOE1Q96GM8 510 aaKnown RBP11.72□□□□□ -0.53
SLX4-201ENST00000294008 SLC17A9Q9BYT1 436 aa11.72□□□□□ -0.53
SLX4-201ENST00000294008 DHX33Q9H6R0 707 aaKnown RBP11.72□□□□□ -0.53
SLX4-201ENST00000294008 EHFQ9NZC4 300 aa11.72□□□□□ -0.53
SLX4-201ENST00000294008 ZMAT5Q9UDW3 170 aaKnown RBP11.72□□□□□ -0.53
SLX4-201ENST00000294008 NPC1O15118 1278 aa11.72□□□□□ -0.53
SLX4-201ENST00000294008 ZNF182P17025 639 aaPredicted RBP11.72□□□□□ -0.53
SLX4-201ENST00000294008 DNAJB1P25685 340 aa11.72□□□□□ -0.53
SLX4-201ENST00000294008 PRDX3P30048 256 aaKnown RBP11.72□□□□□ -0.53
SLX4-201ENST00000294008 UBE2IP63279 158 aaKnown RBP11.72□□□□□ -0.53
SLX4-201ENST00000294008 ZXDBP98169 803 aa11.72□□□□□ -0.53
SLX4-201ENST00000294008 FKBP1CQ5VVH2 108 aa11.72□□□□□ -0.53
SLX4-201ENST00000294008 XKR5Q6UX68 686 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms