RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 KIAA0513O60268 411 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 UGT2B17O75795 530 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 IL2RAP01589 272 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 UBL4AP11441 157 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 CRATP43155 626 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 P2RX1P51575 399 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 HSPB2Q16082 182 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 BCL2A1Q16548 175 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 TYW3Q6IPR3 259 aaKnown RBP22.72■■□□□ 1.23
PDF-201ENST00000288022 CBLN3Q6UW01 205 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 ZBTB8AQ96BR9 441 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 AURKBQ96GD4 344 aaPredicted RBP22.72■■□□□ 1.23
PDF-201ENST00000288022 UCK2Q9BZX2 261 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 CALHM2Q9HA72 323 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 KCNJ16Q9NPI9 418 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 KCNE5Q9UJ90 142 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 PCNX3Q9H6A9 2034 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 CLCA1A8K7I4 914 aa22.71■■□□□ 1.23
PDF-201ENST00000288022 ZNF264O43296 627 aa22.71■■□□□ 1.23
PDF-201ENST00000288022 CYP7B1O75881 506 aa22.71■■□□□ 1.23
PDF-201ENST00000288022 TOXO94900 526 aa22.71■■□□□ 1.23
PDF-201ENST00000288022 H6PDO95479 791 aa22.71■■□□□ 1.23
PDF-201ENST00000288022 NR2F1P10589 423 aa22.71■■□□□ 1.23
PDF-201ENST00000288022 ZNF17P17021 662 aa22.71■■□□□ 1.23
PDF-201ENST00000288022 TIMP3P35625 211 aa22.71■■□□□ 1.23
PDF-201ENST00000288022 CCR4P51679 360 aa22.71■■□□□ 1.23
PDF-201ENST00000288022 SYPL1Q16563 259 aa22.71■■□□□ 1.23
PDF-201ENST00000288022 PLPPR5Q32ZL2 321 aa22.71■■□□□ 1.23
PDF-201ENST00000288022 FRRS1Q6ZNA5 592 aa22.71■■□□□ 1.23
PDF-201ENST00000288022 ZNF619Q8N2I2 560 aa22.71■■□□□ 1.23
PDF-201ENST00000288022 ANKFN1Q8N957 763 aa22.71■■□□□ 1.23
PDF-201ENST00000288022 TRNT1Q96Q11 434 aaKnown RBP22.71■■□□□ 1.23
PDF-201ENST00000288022 KLHDC3Q9BQ90 382 aa22.71■■□□□ 1.23
PDF-201ENST00000288022 TMEM120AQ9BXJ8 343 aa22.71■■□□□ 1.23
PDF-201ENST00000288022 PAIP1Q9H074 479 aaKnown RBP22.71■■□□□ 1.23
PDF-201ENST00000288022 TMEM45AQ9NWC5 275 aa22.71■■□□□ 1.23
PDF-201ENST00000288022 MED12Q93074 2177 aa22.7■■□□□ 1.23
PDF-201ENST00000288022 CENPVL1A0A0U1RR11 272 aa22.7■■□□□ 1.22
PDF-201ENST00000288022 PRAMEF27A3QJZ7 478 aa22.7■■□□□ 1.22
PDF-201ENST00000288022 CSTAP01040 98 aa22.7■■□□□ 1.22
PDF-201ENST00000288022 GUSBP08236 651 aa22.7■■□□□ 1.22
PDF-201ENST00000288022 ETFAP13804 333 aa22.7■■□□□ 1.22
PDF-201ENST00000288022 CAPN3P20807 821 aa22.7■■□□□ 1.22
PDF-201ENST00000288022 SUMO3P55854 103 aaPredicted RBP22.7■■□□□ 1.22
PDF-201ENST00000288022 CHRNEQ04844 493 aa22.7■■□□□ 1.22
PDF-201ENST00000288022 SF3A3Q12874 501 aaKnown RBP eCLIP22.7■■□□□ 1.22
PDF-201ENST00000288022 TMEM44Q2T9K0 475 aa22.7■■□□□ 1.22
PDF-201ENST00000288022 HMGN2P46Q86SG4 172 aa22.7■■□□□ 1.22
PDF-201ENST00000288022 RNF145Q96MT1 663 aa22.7■■□□□ 1.22
PDF-201ENST00000288022 SAP130Q9H0E3 1048 aa22.7■■□□□ 1.22
PDF-201ENST00000288022 STOML1Q9UBI4 398 aa22.7■■□□□ 1.22
PDF-201ENST00000288022 ICAM5Q9UMF0 924 aa22.7■■□□□ 1.22
PDF-201ENST00000288022 PCDHB14Q9Y5E9 798 aa22.7■■□□□ 1.22
PDF-201ENST00000288022 AP4B1Q9Y6B7 739 aa22.7■■□□□ 1.22
PDF-201ENST00000288022 A0A096LPI6 279 aa22.69■■□□□ 1.22
PDF-201ENST00000288022 MBD3L4A6NDZ8 208 aaPredicted RBP22.69■■□□□ 1.22
PDF-201ENST00000288022 MBD3L3A6NE82 208 aaPredicted RBP22.69■■□□□ 1.22
PDF-201ENST00000288022 MBD3L5A6NJ08 208 aaPredicted RBP22.69■■□□□ 1.22
PDF-201ENST00000288022 C19orf84I3L1E1 186 aa22.69■■□□□ 1.22
PDF-201ENST00000288022 EIF4E2O60573 245 aaKnown RBP22.69■■□□□ 1.22
PDF-201ENST00000288022 CEACAM8P31997 349 aaPredicted RBP22.69■■□□□ 1.22
PDF-201ENST00000288022 MAGEA8P43361 318 aa22.69■■□□□ 1.22
PDF-201ENST00000288022 EEFSECP57772 596 aaKnown RBP22.69■■□□□ 1.22
PDF-201ENST00000288022 MAPK14Q16539 360 aa22.69■■□□□ 1.22
PDF-201ENST00000288022 PLXDC2Q6UX71 529 aa22.69■■□□□ 1.22
PDF-201ENST00000288022 EIF3MQ7L2H7 374 aaKnown RBP22.69■■□□□ 1.22
PDF-201ENST00000288022 GRAMD2AQ8IUY3 354 aa22.69■■□□□ 1.22
PDF-201ENST00000288022 LIX1LQ8IVB5 337 aa22.69■■□□□ 1.22
PDF-201ENST00000288022 GTPBP8Q8N3Z3 284 aaPredicted RBP22.69■■□□□ 1.22
PDF-201ENST00000288022 NAXEQ8NCW5 288 aa22.69■■□□□ 1.22
PDF-201ENST00000288022 TOR1AIP2Q8NFQ8 470 aa22.69■■□□□ 1.22
PDF-201ENST00000288022 MBD3L2Q8NHZ7 208 aaPredicted RBP22.69■■□□□ 1.22
PDF-201ENST00000288022 NPAS1Q99742 590 aa22.69■■□□□ 1.22
PDF-201ENST00000288022 P2RX2Q9UBL9 471 aa22.69■■□□□ 1.22
PDF-201ENST00000288022 L3MBTL1Q9Y468 752 aa22.69■■□□□ 1.22
PDF-201ENST00000288022 C7orf72A4D263 438 aa22.68■■□□□ 1.22
PDF-201ENST00000288022 H0YC42 278 aa22.68■■□□□ 1.22
PDF-201ENST00000288022 CHRM4P08173 479 aa22.68■■□□□ 1.22
PDF-201ENST00000288022 SUCLG1P53597 346 aaKnown RBP22.68■■□□□ 1.22
PDF-201ENST00000288022 MVDP53602 400 aa22.68■■□□□ 1.22
PDF-201ENST00000288022 TPD52P55327 224 aaPredicted RBP22.68■■□□□ 1.22
PDF-201ENST00000288022 CLDN20P56880 219 aa22.68■■□□□ 1.22
PDF-201ENST00000288022 DSTNP60981 165 aa22.68■■□□□ 1.22
PDF-201ENST00000288022 LRRC74BQ6ZQY2 392 aa22.68■■□□□ 1.22
PDF-201ENST00000288022 P4HA3Q7Z4N8 544 aa22.68■■□□□ 1.22
PDF-201ENST00000288022 C9orf106Q8NAJ2 232 aa22.68■■□□□ 1.22
PDF-201ENST00000288022 OR5W2Q8NH69 310 aa22.68■■□□□ 1.22
PDF-201ENST00000288022 OIT3Q8WWZ8 545 aa22.68■■□□□ 1.22
PDF-201ENST00000288022 QRSL1Q9H0R6 528 aaKnown RBP22.68■■□□□ 1.22
PDF-201ENST00000288022 RAD21L1Q9H4I0 556 aa22.68■■□□□ 1.22
PDF-201ENST00000288022 KIAA1549Q9HCM3 1950 aa22.68■■□□□ 1.22
PDF-201ENST00000288022 CLIC1O00299 241 aa22.67■■□□□ 1.22
PDF-201ENST00000288022 DVL2O14641 736 aa22.67■■□□□ 1.22
PDF-201ENST00000288022 SNRPB2P08579 225 aaKnown RBP22.67■■□□□ 1.22
PDF-201ENST00000288022 LINGO3P0C6S8 592 aa22.67■■□□□ 1.22
PDF-201ENST00000288022 UBTFL6P0CB48 400 aaPredicted RBP22.67■■□□□ 1.22
PDF-201ENST00000288022 COX6B1P14854 86 aa22.67■■□□□ 1.22
PDF-201ENST00000288022 CD1EP15812 388 aa22.67■■□□□ 1.22
PDF-201ENST00000288022 BMP5P22003 454 aa22.67■■□□□ 1.22
PDF-201ENST00000288022 ME2P23368 584 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms