RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 TRMT5Q32P41 509 aaKnown RBP5.92□□□□□ -1.46
CD44-204ENST00000279452 LIN52Q52LA3 116 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 KLHL26Q53HC5 615 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 VASNQ6EMK4 673 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 TMEM211Q6ICI0 200 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 CBLN3Q6UW01 205 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 RPTNQ6XPR3 784 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 LRRC74BQ6ZQY2 392 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 MRGPRGQ86SM5 289 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 MTDHQ86UE4 582 aaKnown RBP5.92□□□□□ -1.46
CD44-204ENST00000279452 RETREG3Q86VR2 466 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 VRK2Q86Y07 508 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 MSRB3Q8IXL7 192 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 ULK2Q8IYT8 1036 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 PCYOX1LQ8NBM8 494 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 BBS10Q8TAM1 723 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 CA5BP1Q8WTZ4 195 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 SLC38A5Q8WUX1 472 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 RNF138Q8WVD3 245 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 RND1Q92730 232 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 ZBTB8AQ96BR9 441 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 RCN3Q96D15 328 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 RNF145Q96MT1 663 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 CGREF1Q99674 301 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 VKORC1Q9BQB6 163 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 CPPED1Q9BRF8 314 aaPredicted RBP5.92□□□□□ -1.46
CD44-204ENST00000279452 SLC39A3Q9BRY0 314 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 SLC38A1Q9H2H9 487 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 PIF1Q9H611 641 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 ARMC7Q9H6L4 198 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 RUBCNLQ9H714 662 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.92□□□□□ -1.46
CD44-204ENST00000279452 MED17Q9NVC6 651 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 STOML1Q9UBI4 398 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 KCNE5Q9UJ90 142 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 SLC13A4Q9UKG4 626 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 ANGPT4Q9Y264 503 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 SLC35A3Q9Y2D2 325 aa5.92□□□□□ -1.46
CD44-204ENST00000279452 IGLV3-32A0A0A0MS00 114 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 A0A0G2JPF8 293 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 AGAP5A6NIR3 686 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 CLCA1A8K7I4 914 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 HNRNPCL2B2RXH8 293 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 B4DXG7 233 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 HNRNPCL3B7ZW38 293 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 PRSS44E7EML9 344 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 NPIPB9F8W1W9 429 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 FBP2O00757 339 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 ADAM10O14672 748 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 AIM2O14862 343 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 ZIC3O60481 467 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 SNX3O60493 162 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 EIF4E2O60573 245 aaKnown RBP5.91□□□□□ -1.46
CD44-204ENST00000279452 HNRNPCL1O60812 293 aaKnown RBP5.91□□□□□ -1.46
CD44-204ENST00000279452 TFPTP0C1Z6 253 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 HNRNPCL4P0DMR1 293 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 CCNA2P20248 432 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 SLC6A2P23975 617 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 CHMP24386 653 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 SFTPDP35247 375 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 PTGER4P35408 488 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 EIF1AXP47813 144 aaKnown RBP5.91□□□□□ -1.46
CD44-204ENST00000279452 NUDT2P50583 147 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 MVDP53602 400 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 GFRA1P56159 465 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 NUP107P57740 925 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 EEFSECP57772 596 aaKnown RBP5.91□□□□□ -1.46
CD44-204ENST00000279452 RPS3AP61247 264 aaKnown RBP5.91□□□□□ -1.46
CD44-204ENST00000279452 NCALDP61601 193 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 KCNJ10P78508 379 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 ADORA2A-AS1P86434 159 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 CDK6Q00534 326 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 MERTKQ12866 999 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 SKP2Q13309 424 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 ART3Q13508 389 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 SELPLGQ14242 412 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 FGFBP1Q14512 234 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 QPRTQ15274 297 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 TOMM34Q15785 309 aaPredicted RBP5.91□□□□□ -1.46
CD44-204ENST00000279452 PLPPR5Q32ZL2 321 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 ACSF3Q4G176 576 aaPredicted RBP5.91□□□□□ -1.46
CD44-204ENST00000279452 RUNDC3AQ59EK9 446 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 NHSL2Q5HYW2 709 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 EMC4Q5J8M3 183 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 ZNF311Q5JNZ3 666 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 MRPL2Q5T653 305 aaKnown RBP5.91□□□□□ -1.46
CD44-204ENST00000279452 PLXDC2Q6UX71 529 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 DLEU7Q6UYE1 221 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 ZNF836Q6ZNA1 936 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 KRT73Q86Y46 540 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 GRAMD2AQ8IUY3 354 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 LACC1Q8IV20 430 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 CCDC71Q8IV32 467 aaPredicted RBP5.91□□□□□ -1.46
CD44-204ENST00000279452 CADM2Q8N3J6 435 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 DPP10Q8N608 796 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 C11orf65Q8NCR3 313 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 OR52P1PQ8NH57 321 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 OR5W2Q8NH69 310 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 FBXO27Q8NI29 283 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 RNF217Q8TC41 542 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms