RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ETV5P41161 510 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 SLC15A1P46059 708 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 ETV1P50549 477 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 IRF3Q14653 427 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 SPHARQ15513 63 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 CT45A2Q5DJT8 189 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 C17orf82Q86X59 251 aaPredicted RBP16.58■□□□□ 0.24
CAPN1-201ENST00000279247 DYNC2LI1Q8TCX1 351 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 SENP5Q96HI0 755 aaPredicted RBP16.58■□□□□ 0.24
CAPN1-201ENST00000279247 SLC7A5P2Q9GIP4 190 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 OR52D1Q9H346 318 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 HHATLQ9HCP6 504 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 TOR4AQ9NXH8 423 aa16.58■□□□□ 0.24
CAPN1-201ENST00000279247 PRAMEF2O60811 474 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 MAP3K8P41279 467 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 GPR3P46089 330 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 GXYLT1Q4G148 440 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 ZCCHC12Q6PEW1 402 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 OGFOD3Q6PK18 319 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 CD300LDQ6UXZ3 194 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 ZNF620Q6ZNG0 422 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 LAPTM4BQ86VI4 370 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 FAM26EQ8N5C1 309 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 TMEM163Q8TC26 289 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 CDCA4Q9BXL8 241 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 TPK1Q9H3S4 243 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 A0A1B0GWA3 101 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 ZNF749O43361 778 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 HBQ1P09105 142 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 RPS4Y1P22090 263 aaKnown RBP16.57■□□□□ 0.24
CAPN1-201ENST00000279247 FPR3P25089 353 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 CD79BP40259 229 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 SLC9A3P48764 834 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 CDH11P55287 796 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 SSX1Q16384 188 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 LPAL2Q16609 132 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 ALG10BQ5I7T1 473 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 UBALD2Q8IYN6 164 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 MCFD2Q8NI22 146 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 FANK1Q8TC84 345 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 GATAD2BQ8WXI9 593 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 PIGKQ92643 395 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 SH3YL1Q96HL8 342 aaPredicted RBP16.57■□□□□ 0.24
CAPN1-201ENST00000279247 TBX5Q99593 518 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 PRDM9Q9NQV7 894 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 SIDT1Q9NXL6 827 aaKnown RBP16.57■□□□□ 0.24
CAPN1-201ENST00000279247 CLCA3PQ9Y6N3 262 aa16.57■□□□□ 0.24
CAPN1-201ENST00000279247 CSTF2P33240 577 aaKnown RBP eCLIP16.56■□□□□ 0.24
CAPN1-201ENST00000279247 ARRB1P49407 418 aaPredicted RBP16.56■□□□□ 0.24
CAPN1-201ENST00000279247 ZNF829Q3KNS6 432 aaPredicted RBP16.56■□□□□ 0.24
CAPN1-201ENST00000279247 KLHL12Q53G59 568 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 PERM1Q5SV97 790 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 ZNF367Q7RTV3 350 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 IGFN1Q86VF2 1251 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 PLXDC1Q8IUK5 500 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 CPOQ8IVL8 374 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 DNASE2BQ8WZ79 361 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 CCDC74AQ96AQ1 378 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 BPIFA2Q96DR5 249 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 CRELD1Q96HD1 420 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 ART5Q96L15 291 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 NDC1Q9BTX1 674 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 CBLCQ9ULV8 474 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 FER1L5A0AVI2 2057 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 SOCS6O14544 535 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 SERPINI2O75830 405 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 CFIP05156 583 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 INHBBP09529 407 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 HPGDP15428 266 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 PLBD1Q6P4A8 553 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 THSD4Q6ZMP0 1018 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 BCORP1Q8N888 145 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 OSTF1Q92882 214 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 BORCS5Q969J3 196 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 OPALINQ96PE5 141 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 CD180Q99467 661 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 ELF4Q99607 663 aaPredicted RBP16.56■□□□□ 0.24
CAPN1-201ENST00000279247 MESP1Q9BRJ9 268 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 IFT27Q9BW83 186 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 MEPEQ9NQ76 525 aaPredicted RBP16.56■□□□□ 0.24
CAPN1-201ENST00000279247 UNC119BA6NIH7 251 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 C17orf51A8MQB3 221 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 CSTAP01040 98 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 MYL12AP19105 171 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 MTNR1AP48039 350 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 TEKQ02763 1124 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 PGGHGQ32M88 737 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 ARHGAP40Q5TG30 622 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 CYB561A3Q8NBI2 242 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 POGLUT1Q8NBL1 392 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 OR2T33Q8NG76 320 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 C9orf43Q8TAL5 461 aaPredicted RBP16.56■□□□□ 0.24
CAPN1-201ENST00000279247 UBQLN3Q9H347 655 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 FGF21Q9NSA1 209 aa16.56■□□□□ 0.24
CAPN1-201ENST00000279247 YARS2Q9Y2Z4 477 aaKnown RBP16.56■□□□□ 0.24
CAPN1-201ENST00000279247 TP53BP1Q12888 1972 aaPredicted RBP16.55■□□□□ 0.24
CAPN1-201ENST00000279247 CCRL2O00421 344 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 NUDT21O43809 227 aaKnown RBP16.55■□□□□ 0.24
CAPN1-201ENST00000279247 AK1P00568 194 aa16.55■□□□□ 0.24
CAPN1-201ENST00000279247 ZGLP1P0C6A0 271 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms