RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 CEP290O15078 2479 aa4.15□□□□□ -1.75
CD44-202ENST00000278385 BAZ2BQ9UIF8 2168 aaKnown RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 WDR91A4D1P6 747 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 MTMR11A4FU01 709 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 CASTOR2A6NHX0 329 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 H0YIZ8 118 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 BTN3A3O00478 584 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 MGST3O14880 152 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 RNF8O76064 485 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 SERPIND1P05546 499 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 HIST1H2AGP0C0S8 130 aaPredicted RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 LINC00271P0C7V0 271 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 ENO3P13929 434 aaPredicted RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 TNNI1P19237 187 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 PSMA2P25787 234 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 CYLC1P35663 651 aaPredicted RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 GPR12P47775 334 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 CDC34P49427 236 aaPredicted RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 EMP2P54851 167 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 KCNK10P57789 538 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 UBE2G2P60604 165 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 PPIAP62937 165 aaKnown RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 TFF2Q03403 129 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 LGALS3BPQ08380 585 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 EXOSC2Q13868 293 aaKnown RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 TFDP1Q14186 410 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 CTTNQ14247 550 aaKnown RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 TMEM132DQ14C87 1099 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 ANXA2RQ3ZCQ2 193 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 SYT14P1Q58G82 188 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 TTMPQ5BVD1 217 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 XKR4Q5GH76 650 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 LGSNQ5TDP6 509 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 GGNBP1Q5YKI7 109 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 NCAPH2Q6IBW4 605 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 OR4F3Q6IEY1 312 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 ANKRD54Q6NXT1 300 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 H3F3CQ6NXT2 135 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 METTL2BQ6P1Q9 378 aaKnown RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 PAGE2Q7Z2X7 111 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 ABHD12BQ7Z5M8 362 aaPredicted RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 PATL1Q86TB9 770 aaKnown RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 PARGQ86W56 976 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 CCDC50Q8IVM0 306 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 SLC38A6Q8IZM9 456 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 TEX26Q8N6G2 289 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 TMEM104Q8NE00 496 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 TTLQ8NG68 377 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 OR2L3Q8NG85 312 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 OR7G2Q8NG99 324 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 OR10H4Q8NGA5 316 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 ZNF398Q8TD17 642 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 SSMEM1Q8WWF3 244 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 HIST1H2ACQ93077 130 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 CCDC124Q96CT7 223 aaKnown RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 SH3YL1Q96HL8 342 aaPredicted RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 METTL2AQ96IZ6 378 aaKnown RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 CDCA3Q99618 268 aaPredicted RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 CMKLR1Q99788 373 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 LXNQ9BS40 222 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 CHID1Q9BWS9 393 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 DERL2Q9GZP9 239 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 HIPK2Q9H2X6 1198 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 SAV1Q9H4B6 383 aaPredicted RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 ESRP2Q9H6T0 727 aaKnown RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 MARCH7Q9H992 704 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 SEBOXQ9HB31 216 aaPredicted RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 PAQR5Q9NXK6 330 aaPredicted RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 LHX3Q9UBR4 397 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 EPHA6Q9UF33 1036 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 NAGKQ9UJ70 344 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 ABCG2Q9UNQ0 655 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 TMED7Q9Y3B3 224 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 WDR45Q9Y484 360 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 TIMM22Q9Y584 194 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 HEMK1Q9Y5R4 338 aaPredicted RBP4.14□□□□□ -1.75
CD44-202ENST00000278385 SZT2Q5T011 3432 aa4.14□□□□□ -1.75
CD44-202ENST00000278385 RANBP2P49792 3224 aaKnown RBP4.13□□□□□ -1.75
CD44-202ENST00000278385 PPIAL4CA0A0B4J2A2 164 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 TMEM150BA6NC51 233 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 ZNF840PA6NDX5 716 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 MGAT4DA6NG13 374 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 OR6C70A6NIJ9 312 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 A6NNC1 897 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 A8MUA0 341 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 LAD1O00515 517 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 FBP2O00757 339 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 DLGAP1O14490 977 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 TOR1AO14656 332 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 CHUKO15111 745 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 RAD51BO15315 384 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 EPOP01588 193 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 PRKCGP05129 697 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 SERPINE2P07093 398 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 STSP08842 583 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 ELFN1P0C7U0 828 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 SMIM18P0DKX4 95 aa4.13□□□□□ -1.75
CD44-202ENST00000278385 PPIAL4GP0DN37 164 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms