RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 ZNF658BQ4V348 819 aaPredicted RBP9.63□□□□□ -0.87
UPF3B-201ENST00000276201 OR2G6Q5TZ20 316 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 ZNF57Q68EA5 555 aaPredicted RBP9.63□□□□□ -0.87
UPF3B-201ENST00000276201 PYHIN1Q6K0P9 492 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 SLC27A4Q6P1M0 643 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 BHLHB9Q6PI77 547 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 RASSF6Q6ZTQ3 369 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 FGD2Q7Z6J4 655 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 ABI3BPQ7Z7G0 1075 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 OAFQ86UD1 273 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 TPRA1Q86W33 373 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 UBE2J2Q8N2K1 259 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 TRAM1L1Q8N609 369 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 OR4K5Q8NGD3 323 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 OR4D11Q8NGI4 311 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 BBS10Q8TAM1 723 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 NEIL3Q8TAT5 605 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 SETD7Q8WTS6 366 aaKnown RBP9.63□□□□□ -0.87
UPF3B-201ENST00000276201 GATAD2BQ8WXI9 593 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 ADAMTS14Q8WXS8 1223 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 NEIL2Q969S2 332 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 BMFQ96LC9 184 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 PRRC1Q96M27 445 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 CAMK1GQ96NX5 476 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 ACAT2Q9BWD1 397 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 SLC6A16Q9GZN6 736 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 PPIL3Q9H2H8 161 aaKnown RBP9.63□□□□□ -0.87
UPF3B-201ENST00000276201 DPAGT1Q9H3H5 408 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 LYARQ9NX58 379 aaKnown RBP9.63□□□□□ -0.87
UPF3B-201ENST00000276201 KIF25Q9UIL4 384 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 DYRK1BQ9Y463 629 aa9.63□□□□□ -0.87
UPF3B-201ENST00000276201 DCDC2BA2VCK2 349 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 ITGA10O75578 1167 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 RGS9O75916 674 aaPredicted RBP9.62□□□□□ -0.87
UPF3B-201ENST00000276201 BCHEP06276 602 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 SULT1A3P0DMM9 295 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 SULT1A4P0DMN0 295 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 CD59P13987 128 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 ELK1P19419 428 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 DDCP20711 480 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 PTGS2P35354 604 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 IGFALSP35858 605 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 AVPR1BP47901 424 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 PRLHRP49683 370 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 ARFIP1P53367 373 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 PCBP4P57723 403 aaKnown RBP9.62□□□□□ -0.87
UPF3B-201ENST00000276201 MC1RQ01726 317 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 DHODHQ02127 395 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 PRAMEF14Q5SWL7 426 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 AADACL4Q5VUY2 407 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 ADNP2Q6IQ32 1131 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 TMEM65Q6PI78 240 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 BAIAP2L2Q6UXY1 529 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 LIPIQ6XZB0 460 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 BCDIN3DQ7Z5W3 292 aaKnown RBP9.62□□□□□ -0.87
UPF3B-201ENST00000276201 ZNF655Q8N720 491 aaPredicted RBP9.62□□□□□ -0.87
UPF3B-201ENST00000276201 TOR1AIP2Q8NFQ8 470 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 OR11H7Q8NGC8 314 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 OR5AK3PQ8NH89 298 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 KLHDC7BQ96G42 594 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 FOPNLQ96NB1 174 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 ACTR6Q9GZN1 396 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 OR51J1Q9H342 316 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 MBNL1Q9NR56 388 aaKnown RBP9.62□□□□□ -0.87
UPF3B-201ENST00000276201 AHSPQ9NZD4 102 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 UBQLN2Q9UHD9 624 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 CLCA2Q9UQC9 943 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 HS3ST3A1Q9Y663 406 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 DCHS1Q96JQ0 3298 aa9.62□□□□□ -0.87
UPF3B-201ENST00000276201 SMLR1H3BR10 107 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 IL3P08700 152 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 ELFN1P0C7U0 828 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 THEGLP0DJG4 465 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 NPPBP16860 134 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 VIPR1P32241 457 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 CAPZA2P47755 286 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 TSPAN31Q12999 210 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 SLBPQ14493 270 aaKnown RBP eCLIP9.61□□□□□ -0.87
UPF3B-201ENST00000276201 IRF4Q15306 451 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 SHBQ15464 509 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 FAM214AQ32MH5 1076 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 NXPE4Q6UWF7 544 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 TMEM91Q6ZNR0 172 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 COMMD7Q86VX2 200 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 SLC22A18ASQ8N1D0 253 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 IQCF1Q8N6M8 205 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 TEX47Q8TBZ9 253 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 TMEM159Q96B96 161 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 MED8Q96G25 268 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 THAP7Q9BT49 309 aaPredicted RBP9.61□□□□□ -0.87
UPF3B-201ENST00000276201 WACQ9BTA9 647 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 FNDC11Q9BVV2 318 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 PPA2Q9H2U2 334 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 OSGEPL1Q9H4B0 414 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 MVB12BQ9H7P6 319 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 GPR27Q9NS67 375 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 ACSS1Q9NUB1 689 aaPredicted RBP9.61□□□□□ -0.87
UPF3B-201ENST00000276201 EXTL2Q9UBQ6 330 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 SCP2D1Q9UJQ7 156 aa9.61□□□□□ -0.87
UPF3B-201ENST00000276201 SLC9A8Q9Y2E8 581 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms