RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 OR14L1PQ8NHC6 308 aa11.58□□□□□ -0.56
SS18-202ENST00000269138 BBS10Q8TAM1 723 aa11.58□□□□□ -0.56
SS18-202ENST00000269138 NEIL3Q8TAT5 605 aa11.58□□□□□ -0.56
SS18-202ENST00000269138 ZNF583Q96ND8 569 aa11.58□□□□□ -0.56
SS18-202ENST00000269138 NPAS1Q99742 590 aa11.58□□□□□ -0.56
SS18-202ENST00000269138 SH3GL1Q99961 368 aa11.58□□□□□ -0.56
SS18-202ENST00000269138 ECSITQ9BQ95 431 aa11.58□□□□□ -0.56
SS18-202ENST00000269138 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.58□□□□□ -0.56
SS18-202ENST00000269138 SUCOQ9UBS9 1254 aaKnown RBP11.58□□□□□ -0.56
SS18-202ENST00000269138 ICAM5Q9UMF0 924 aa11.58□□□□□ -0.56
SS18-202ENST00000269138 OSGIN2Q9Y236 505 aa11.58□□□□□ -0.56
SS18-202ENST00000269138 ZNF407Q9C0G0 2248 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 RP1L1Q8IWN7 2480 aaPredicted RBP11.57□□□□□ -0.56
SS18-202ENST00000269138 NPIPA2E9PIF3 369 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 NPIPA3F8WFD2 350 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 ZNF264O43296 627 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 SUSD5O60279 629 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 HCN1O60741 890 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 WISP1O95388 367 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 DBIP07108 87 aaKnown RBP11.57□□□□□ -0.56
SS18-202ENST00000269138 IL7RP16871 459 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 HK1P19367 917 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 MSX1P28360 303 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 PTGS2P35354 604 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 SLC7A2P52569 658 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 B3GALT5-AS1P59052 145 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 PSME3P61289 254 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 SKP2Q13309 424 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 KRT72Q14CN4 511 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 TOMM34Q15785 309 aaPredicted RBP11.57□□□□□ -0.56
SS18-202ENST00000269138 DCST1Q5T197 706 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 PRAMEF8Q5VWM4 474 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 PRAMEF7Q5VXH5 474 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 ARHGAP11AQ6P4F7 1023 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 ZNF836Q6ZNA1 936 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 SERPINA11Q86U17 422 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 CLIP4Q8N3C7 705 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 TMCO5AQ8N6Q1 288 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 METTL25Q8N6Q8 603 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 C11orf65Q8NCR3 313 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 HIPK4Q8NE63 616 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 PRR7Q8TB68 274 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 WDR60Q8WVS4 1066 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 PMM1Q92871 262 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 LAT2Q9GZY6 243 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 PTGES2Q9H7Z7 377 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 RLIMQ9NVW2 624 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 VDAC3Q9Y277 283 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 ZNF835Q9Y2P0 537 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 MRPS18CQ9Y3D5 142 aaKnown RBP11.57□□□□□ -0.56
SS18-202ENST00000269138 CHST2Q9Y4C5 530 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 PCNX3Q9H6A9 2034 aa11.57□□□□□ -0.56
SS18-202ENST00000269138 C15orf38-AP3S2A0A0A6YYH1 394 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 NME4O00746 187 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 AQP7O14520 342 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 EIF4E2O60573 245 aaKnown RBP11.56□□□□□ -0.56
SS18-202ENST00000269138 SLC19A2O60779 497 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 ADAM11O75078 769 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 T-ENOLP0DO92 83 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 NID1P14543 1247 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 BMP7P18075 431 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 PCGF2P35227 344 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 P2RX1P51575 399 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 CCR4P51679 360 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 EEF1A1P68104 462 aaKnown RBP11.56□□□□□ -0.56
SS18-202ENST00000269138 RBBP4Q09028 425 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 C3AR1Q16581 482 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 MRPL2Q5T653 305 aaKnown RBP11.56□□□□□ -0.56
SS18-202ENST00000269138 IFNEQ86WN2 208 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 LSRQ86X29 649 aaPredicted RBP11.56□□□□□ -0.56
SS18-202ENST00000269138 FAM71CQ8NEG0 241 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 OR5M9Q8NGP3 310 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 GPR119Q8TDV5 335 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 OIT3Q8WWZ8 545 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 NSL1Q96IY1 281 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 HOPXQ9BPY8 73 aaPredicted RBP11.56□□□□□ -0.56
SS18-202ENST00000269138 UGT2B28Q9BY64 529 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 MED17Q9NVC6 651 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 ANGPT4Q9Y264 503 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 ZNF443Q9Y2A4 671 aaPredicted RBP11.56□□□□□ -0.56
SS18-202ENST00000269138 SLC35A3Q9Y2D2 325 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 GPC6Q9Y625 555 aaPredicted RBP11.56□□□□□ -0.56
SS18-202ENST00000269138 ZGRF1Q86YA3 2104 aa11.56□□□□□ -0.56
SS18-202ENST00000269138 TPST1O60507 370 aa11.55□□□□□ -0.56
SS18-202ENST00000269138 NUDT14O95848 222 aa11.55□□□□□ -0.56
SS18-202ENST00000269138 TPOP07202 933 aa11.55□□□□□ -0.56
SS18-202ENST00000269138 LINGO3P0C6S8 592 aa11.55□□□□□ -0.56
SS18-202ENST00000269138 PABPC4LP0CB38 370 aaKnown RBP11.55□□□□□ -0.56
SS18-202ENST00000269138 ESRRAP11474 423 aaPredicted RBP11.55□□□□□ -0.56
SS18-202ENST00000269138 ETS2P15036 469 aa11.55□□□□□ -0.56
SS18-202ENST00000269138 ABOP16442 354 aa11.55□□□□□ -0.56
SS18-202ENST00000269138 STARP49675 285 aa11.55□□□□□ -0.56
SS18-202ENST00000269138 GFRA1P56159 465 aa11.55□□□□□ -0.56
SS18-202ENST00000269138 PCBP3P57721 371 aaKnown RBP11.55□□□□□ -0.56
SS18-202ENST00000269138 SLC25A3Q00325 362 aa11.55□□□□□ -0.56
SS18-202ENST00000269138 LIPEQ05469 1076 aa11.55□□□□□ -0.56
SS18-202ENST00000269138 RBPJQ06330 500 aa11.55□□□□□ -0.56
SS18-202ENST00000269138 CRYZQ08257 329 aaKnown RBP11.55□□□□□ -0.56
SS18-202ENST00000269138 GANABQ14697 944 aaKnown RBP11.55□□□□□ -0.56
SS18-202ENST00000269138 VMACQ2NL98 169 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms