RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 TRIM2Q9C040 744 aa15.06■□□□□ 0
TPM1-201ENST00000267996 KLF4O43474 513 aa15.05■□□□□ -0
TPM1-201ENST00000267996 KLF7O75840 302 aaPredicted RBP15.05■□□□□ -0
TPM1-201ENST00000267996 CSTAP01040 98 aa15.05■□□□□ -0
TPM1-201ENST00000267996 ATP6V1B1P15313 513 aa15.05■□□□□ -0
TPM1-201ENST00000267996 GSTM3P21266 225 aa15.05■□□□□ -0
TPM1-201ENST00000267996 TSPAN31Q12999 210 aa15.05■□□□□ -0
TPM1-201ENST00000267996 NCF4Q15080 339 aa15.05■□□□□ -0
TPM1-201ENST00000267996 CCDC157Q569K6 752 aa15.05■□□□□ -0
TPM1-201ENST00000267996 HSDL2Q6YN16 418 aa15.05■□□□□ -0
TPM1-201ENST00000267996 GLRX5Q86SX6 157 aa15.05■□□□□ -0
TPM1-201ENST00000267996 ZNF440Q8IYI8 595 aa15.05■□□□□ -0
TPM1-201ENST00000267996 ENTHD1Q8IYW4 607 aa15.05■□□□□ -0
TPM1-201ENST00000267996 NLGN4XQ8N0W4 816 aa15.05■□□□□ -0
TPM1-201ENST00000267996 GALNT6Q8NCL4 622 aa15.05■□□□□ -0
TPM1-201ENST00000267996 CNIH3Q8TBE1 160 aa15.05■□□□□ -0
TPM1-201ENST00000267996 PIGXQ8TBF5 258 aa15.05■□□□□ -0
TPM1-201ENST00000267996 UBE2FQ969M7 185 aa15.05■□□□□ -0
TPM1-201ENST00000267996 TAAR9Q96RI9 348 aa15.05■□□□□ -0
TPM1-201ENST00000267996 ADOQ96SZ5 270 aa15.05■□□□□ -0
TPM1-201ENST00000267996 DDA1Q9BW61 102 aa15.05■□□□□ -0
TPM1-201ENST00000267996 TMEM27Q9HBJ8 222 aa15.05■□□□□ -0
TPM1-201ENST00000267996 A0A0B4J2E0 115 aa15.04■□□□□ -0
TPM1-201ENST00000267996 A0A1B0GX12 115 aa15.04■□□□□ -0
TPM1-201ENST00000267996 SLC1A7O00341 560 aa15.04■□□□□ -0
TPM1-201ENST00000267996 CSO75390 466 aaKnown RBP15.04■□□□□ -0
TPM1-201ENST00000267996 WBP4O75554 376 aaKnown RBP15.04■□□□□ -0
TPM1-201ENST00000267996 REM1O75628 298 aa15.04■□□□□ -0
TPM1-201ENST00000267996 NTN1O95631 604 aa15.04■□□□□ -0
TPM1-201ENST00000267996 MT-CO3P00414 261 aa15.04■□□□□ -0
TPM1-201ENST00000267996 UMODP07911 640 aa15.04■□□□□ -0
TPM1-201ENST00000267996 ABCD3P28288 659 aa15.04■□□□□ -0
TPM1-201ENST00000267996 PNLIPRP2P54317 469 aa15.04■□□□□ -0
TPM1-201ENST00000267996 NR1H2P55055 460 aa15.04■□□□□ -0
TPM1-201ENST00000267996 SLC26A5P58743 744 aa15.04■□□□□ -0
TPM1-201ENST00000267996 GABARAPL2P60520 117 aa15.04■□□□□ -0
TPM1-201ENST00000267996 TEKQ02763 1124 aa15.04■□□□□ -0
TPM1-201ENST00000267996 APOOLQ6UXV4 268 aa15.04■□□□□ -0
TPM1-201ENST00000267996 WDR88Q6ZMY6 472 aa15.04■□□□□ -0
TPM1-201ENST00000267996 PRR22Q8IZ63 422 aa15.04■□□□□ -0
TPM1-201ENST00000267996 RNF113BQ8IZP6 322 aaKnown RBP15.04■□□□□ -0
TPM1-201ENST00000267996 DEPDC4Q8N2C3 294 aa15.04■□□□□ -0
TPM1-201ENST00000267996 AMER2Q8N7J2 671 aa15.04■□□□□ -0
TPM1-201ENST00000267996 RHOXF1Q8NHV9 184 aa15.04■□□□□ -0
TPM1-201ENST00000267996 TMEM255BQ8WV15 326 aa15.04■□□□□ -0
TPM1-201ENST00000267996 OMA1Q96E52 524 aa15.04■□□□□ -0
TPM1-201ENST00000267996 PRRX2Q99811 253 aa15.04■□□□□ -0
TPM1-201ENST00000267996 SPRY4Q9C004 299 aa15.04■□□□□ -0
TPM1-201ENST00000267996 EXOSC3Q9NQT5 275 aaKnown RBP15.04■□□□□ -0
TPM1-201ENST00000267996 RNF6Q9Y252 685 aa15.04■□□□□ -0
TPM1-201ENST00000267996 TEX51A0A1B0GUA7 166 aa15.03■□□□□ -0
TPM1-201ENST00000267996 A0A1B0GWA3 101 aa15.03■□□□□ -0
TPM1-201ENST00000267996 CDC14CA4D256 554 aa15.03■□□□□ -0
TPM1-201ENST00000267996 SCDO00767 359 aa15.03■□□□□ -0
TPM1-201ENST00000267996 STK17BO94768 372 aa15.03■□□□□ -0
TPM1-201ENST00000267996 ANGPTL1O95841 491 aa15.03■□□□□ -0
TPM1-201ENST00000267996 DLGAP3O95886 979 aa15.03■□□□□ -0
TPM1-201ENST00000267996 GABRB1P18505 474 aa15.03■□□□□ -0
TPM1-201ENST00000267996 FPR3P25089 353 aa15.03■□□□□ -0
TPM1-201ENST00000267996 ALDH3B2P48448 385 aa15.03■□□□□ -0
TPM1-201ENST00000267996 PLCXD2Q0VAA5 305 aa15.03■□□□□ -0
TPM1-201ENST00000267996 SLX4IPQ5VYV7 408 aa15.03■□□□□ -0
TPM1-201ENST00000267996 RRM2BQ7LG56 351 aa15.03■□□□□ -0
TPM1-201ENST00000267996 POGLUT1Q8NBL1 392 aa15.03■□□□□ -0
TPM1-201ENST00000267996 WDR36Q8NI36 951 aaKnown RBP15.03■□□□□ -0
TPM1-201ENST00000267996 APH1BQ8WW43 257 aa15.03■□□□□ -0
TPM1-201ENST00000267996 ADNPQ9H2P0 1102 aa15.03■□□□□ -0
TPM1-201ENST00000267996 ZNF226Q9NYT6 803 aa15.03■□□□□ -0
TPM1-201ENST00000267996 NCDNQ9UBB6 729 aa15.03■□□□□ -0
TPM1-201ENST00000267996 BLOC1S6Q9UL45 172 aa15.03■□□□□ -0
TPM1-201ENST00000267996 PCDHGA3Q9Y5H0 932 aa15.03■□□□□ -0
TPM1-201ENST00000267996 A0A1W2PQD3 144 aa15.03■□□□□ -0
TPM1-201ENST00000267996 PMS2P1A4D2B8 440 aa15.03■□□□□ -0
TPM1-201ENST00000267996 TMEM200CA6NKL6 621 aa15.03■□□□□ -0
TPM1-201ENST00000267996 CHP2O43745 196 aa15.03■□□□□ -0
TPM1-201ENST00000267996 ICOSLGO75144 302 aa15.03■□□□□ -0
TPM1-201ENST00000267996 IGFBP1P08833 259 aaPredicted RBP15.03■□□□□ -0
TPM1-201ENST00000267996 IL12BP29460 328 aa15.03■□□□□ -0
TPM1-201ENST00000267996 KRT20P35900 424 aa15.03■□□□□ -0
TPM1-201ENST00000267996 CLDN6P56747 220 aa15.03■□□□□ -0
TPM1-201ENST00000267996 SKP2Q13309 424 aa15.03■□□□□ -0
TPM1-201ENST00000267996 EIF3IQ13347 325 aaKnown RBP15.03■□□□□ -0
TPM1-201ENST00000267996 PCOLCEQ15113 449 aa15.03■□□□□ -0
TPM1-201ENST00000267996 CD226Q15762 336 aa15.03■□□□□ -0
TPM1-201ENST00000267996 NDUFAF6Q330K2 333 aa15.03■□□□□ -0
TPM1-201ENST00000267996 C12orf73Q69YU5 71 aa15.03■□□□□ -0
TPM1-201ENST00000267996 ZNF773Q6PK81 442 aa15.03■□□□□ -0
TPM1-201ENST00000267996 RASSF6Q6ZTQ3 369 aa15.03■□□□□ -0
TPM1-201ENST00000267996 NRMQ8IXM6 262 aa15.03■□□□□ -0
TPM1-201ENST00000267996 OR2Y1Q8NGV0 311 aa15.03■□□□□ -0
TPM1-201ENST00000267996 FAM81AQ8TBF8 368 aa15.03■□□□□ -0
TPM1-201ENST00000267996 C8orf44Q96CB5 159 aa15.03■□□□□ -0
TPM1-201ENST00000267996 HS6ST2Q96MM7 605 aa15.03■□□□□ -0
TPM1-201ENST00000267996 ZNF426Q9BUY5 554 aa15.03■□□□□ -0
TPM1-201ENST00000267996 AASSQ9UDR5 926 aa15.03■□□□□ -0
TPM1-201ENST00000267996 PTRH2Q9Y3E5 179 aaKnown RBP15.03■□□□□ -0
TPM1-201ENST00000267996 CCDC187A0A096LP49 1063 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 TRBV11-1A0A0K0K1C0 115 aa15.02□□□□□ -0.01
TPM1-201ENST00000267996 A0A1W2PNU3 283 aaPredicted RBP15.02□□□□□ -0.01
TPM1-201ENST00000267996 A0A1W2PQ72 361 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms