RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 YBX1P67809 324 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 E2F1Q01094 437 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 NANOGP1Q8N7R0 232 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 SAMD8Q96LT4 415 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 OPALINQ96PE5 141 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 MYNNQ9NPC7 610 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 DMRT3Q9NQL9 472 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 SLC2A4RGQ9NR83 387 aa10.81□□□□□ -0.68
CLSTN3-201ENST00000266546 IGLV3-16A0A075B6K0 115 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 ARPC4-TTLL3A0A0A6YYG9 625 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 ARPC1BO15143 372 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 FRS3O43559 492 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 SSX4O60224 188 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 SLC25A12O75746 678 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 ZNF432O94892 652 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 MT-ND4P03905 459 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 HNRNPA2B1P22626 353 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 SLC1A3P43003 542 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 TGM4P49221 684 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 CHRNEQ04844 493 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 GAB1Q13480 694 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 BCL2A1Q16548 175 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 AMZ1Q400G9 498 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 MINDY4Q4G0A6 757 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 TMEM215Q68D42 235 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 MSRB3Q8IXL7 192 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 OR52I1Q8NGK6 324 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 OR8S1Q8NH09 359 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 OR5W2Q8NH69 310 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 HAVCR1Q96D42 359 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 MAP6Q96JE9 813 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 LMLNQ96KR4 655 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 ADAD1Q96M93 576 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 XKR8Q9H6D3 395 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 A0A1W2PPL8 197 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 H3BSH0 61 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 GTF2F2P13984 249 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 MAPK3P27361 379 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 SOX9P48436 509 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 DNASE1L1P49184 302 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 ARRB1P49407 418 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 SNRPGP62308 76 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 IHHQ14623 411 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 TOR1AIP1Q5JTV8 583 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 IDO2Q6ZQW0 420 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 ZNF227Q86WZ6 799 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 CALHM3Q86XJ0 350 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 ARMC10Q8N2F6 343 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 ZNF563Q8TA94 476 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 FAM174AQ8TBP5 190 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 GIMAP1Q8WWP7 306 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 MOAP1Q96BY2 351 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 PRRC1Q96M27 445 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 C7orf50Q9BRJ6 194 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 PHF7Q9BWX1 381 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 ATP13A2Q9NQ11 1180 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 ACER3Q9NUN7 267 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 POLHQ9Y253 713 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 OR5K4A6NMS3 321 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 RHPN2P1A8MT19 583 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 F5H0A9 414 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 H0YIV9 168 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 SCN2BO60939 215 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 SPDEFO95238 335 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 LINC00271P0C7V0 271 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 PVALBP20472 110 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 ITGA3P26006 1051 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 GPR50Q13585 617 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 GRK1Q15835 563 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 HACD4Q5VWC8 232 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 KHDRBS2Q5VWX1 349 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 HORMAD2Q8N7B1 307 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 NUP43Q8NFH3 380 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 OR5D16Q8NGK9 328 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 OR56B4Q8NH76 319 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 ANGPTL6Q8NI99 470 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 CNOT9Q92600 299 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 HLA-CQ95604 372 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 ZNF582Q96NG8 517 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 SIRT5Q9NXA8 310 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 BABAM2Q9NXR7 383 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 TRAPPC4Q9Y296 219 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 A0A1B0GVT2 93 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 FAM183AA6NL82 134 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 POM121CA8CG34 1229 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 CTSLP07711 333 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 ITPKBP27987 946 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 MAP3K8P41279 467 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 ALKBH2Q6NS38 261 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 PAQR6Q6TCH4 344 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 LYPD4Q6UWN0 246 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 PTOV1Q86YD1 416 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 CREB3L4Q8TEY5 395 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 SLC38A5Q8WUX1 472 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 APOOQ9BUR5 198 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 SORBS1Q9BX66 1292 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 TRIM2Q9C040 744 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 NDUFB11Q9NX14 153 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 PLEKHA6Q9Y2H5 1048 aa10.8□□□□□ -0.68
CLSTN3-201ENST00000266546 ASCC3Q8N3C0 2202 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms