RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 RAB38P57729 211 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 HERV-K104P61576 105 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 NKX3-2P78367 333 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 SNTB2Q13425 540 aaKnown RBP14.43□□□□□ -0.1
TIMP3-201ENST00000266085 ZNF181Q2M3W8 571 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 PIP5KL1Q5T9C9 394 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 FCRLBQ6BAA4 426 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 ABHD17CQ6PCB6 329 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 BHLHA9Q7RTU4 235 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 DGLUCYQ7Z3D6 616 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 ZNF615Q8N8J6 731 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 SFXN2Q96NB2 322 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 C1QTNF2Q9BXJ5 285 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 FXYD6Q9H0Q3 95 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 GFYI3L273 518 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 PRKRAO75569 313 aaKnown RBP14.43□□□□□ -0.1
TIMP3-201ENST00000266085 SRFP11831 508 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 GTF2F2P13984 249 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 SRYQ05066 204 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 OR5M10Q6IEU7 315 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 ZNF584Q8IVC4 421 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 PATE1Q8WXA2 126 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 ATOH1Q92858 354 aaPredicted RBP14.43□□□□□ -0.1
TIMP3-201ENST00000266085 KLHL15Q96M94 604 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 ATG4BQ9Y4P1 393 aa14.43□□□□□ -0.1
TIMP3-201ENST00000266085 L7N2F9 121 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 FXYD6P3P58550 94 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 DCAF7P61962 342 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 VAMP2P63027 116 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 XKRXQ6PP77 449 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 FAM217AQ8IXS0 508 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 OR5T2Q8NGG2 359 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 EVA1AQ9H8M9 152 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 CD93Q9NPY3 652 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 ZNF443Q9Y2A4 671 aaPredicted RBP14.42□□□□□ -0.1
TIMP3-201ENST00000266085 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.42□□□□□ -0.1
TIMP3-201ENST00000266085 KANTRA0A1W2PQU2 76 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 A6NL46 340 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 BCAS1O75363 584 aaPredicted RBP14.42□□□□□ -0.1
TIMP3-201ENST00000266085 ALPLP05186 524 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 TFPTP0C1Z6 253 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 ITGAMP11215 1152 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 PKLRP30613 574 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 RAB40BQ12829 278 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 CBFBQ13951 182 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 NKAIN2Q5VXU1 208 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 EIF5AL1Q6IS14 154 aaKnown RBP14.42□□□□□ -0.1
TIMP3-201ENST00000266085 ADAMTSL1Q8N6G6 1762 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 ANKRD28O15084 1053 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 ZFAND5O76080 213 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 MAS1P04201 325 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 BCL6P41182 706 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 NKAPLQ5M9Q1 402 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 SLC25A25Q6KCM7 469 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 FOXRED2Q8IWF2 684 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 SDR9C7Q8NEX9 313 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 CASTOR1Q8WTX7 329 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 COQ10AQ96MF6 247 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 OR5B2Q96R09 309 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 CXorf36Q9H7Y0 433 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 UCKL1Q9NWZ5 548 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 MTRF1O75570 445 aaKnown RBP14.42□□□□□ -0.1
TIMP3-201ENST00000266085 KCNK5O95279 499 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 PPP5CP53041 499 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 GLO1Q04760 184 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 LTB4RQ15722 352 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 MRPL2Q5T653 305 aaKnown RBP14.42□□□□□ -0.1
TIMP3-201ENST00000266085 BAIAP2L2Q6UXY1 529 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 CHDHQ8NE62 594 aaPredicted RBP14.42□□□□□ -0.1
TIMP3-201ENST00000266085 ABHD11Q8NFV4 315 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 CREB3L1Q96BA8 519 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 TM4SF18Q96CE8 201 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 TEX37Q96LM6 180 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 SEMA6CQ9H3T2 930 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 ZNF224Q9NZL3 707 aa14.42□□□□□ -0.1
TIMP3-201ENST00000266085 TLCD2A6NGC4 264 aa14.41□□□□□ -0.1
TIMP3-201ENST00000266085 TMX2-CTNND1H3BSU7 103 aa14.41□□□□□ -0.1
TIMP3-201ENST00000266085 PEX11BO96011 259 aa14.41□□□□□ -0.1
TIMP3-201ENST00000266085 CD63P08962 238 aa14.41□□□□□ -0.1
TIMP3-201ENST00000266085 HTRA4P83105 476 aaPredicted RBP14.41□□□□□ -0.1
TIMP3-201ENST00000266085 GXYLT1Q4G148 440 aa14.41□□□□□ -0.1
TIMP3-201ENST00000266085 XKR7Q5GH72 579 aa14.41□□□□□ -0.1
TIMP3-201ENST00000266085 TECPR1Q7Z6L1 1165 aa14.41□□□□□ -0.1
TIMP3-201ENST00000266085 DTX3Q8N9I9 347 aa14.41□□□□□ -0.1
TIMP3-201ENST00000266085 HOXB13Q92826 284 aaPredicted RBP14.41□□□□□ -0.1
TIMP3-201ENST00000266085 RBM24Q9BX46 236 aaKnown RBP14.41□□□□□ -0.1
TIMP3-201ENST00000266085 QRSL1Q9H0R6 528 aaKnown RBP14.41□□□□□ -0.1
TIMP3-201ENST00000266085 IRF2BPLQ9H1B7 796 aa14.41□□□□□ -0.1
TIMP3-201ENST00000266085 POLE4Q9NR33 117 aa14.41□□□□□ -0.1
TIMP3-201ENST00000266085 ERVK13-1Q9NX77 482 aa14.41□□□□□ -0.1
TIMP3-201ENST00000266085 CNOT2Q9NZN8 540 aaKnown RBP14.41□□□□□ -0.1
TIMP3-201ENST00000266085 NSG1A0A0A6YYJ2 146 aa14.41□□□□□ -0.1
TIMP3-201ENST00000266085 C13orf42A0A1B0GVH6 325 aa14.41□□□□□ -0.1
TIMP3-201ENST00000266085 CTSLP07711 333 aa14.41□□□□□ -0.1
TIMP3-201ENST00000266085 ZNF28P17035 718 aa14.41□□□□□ -0.1
TIMP3-201ENST00000266085 GPX2P18283 190 aa14.41□□□□□ -0.1
TIMP3-201ENST00000266085 CFL1P23528 166 aaKnown RBP14.41□□□□□ -0.1
TIMP3-201ENST00000266085 CAPZA1P52907 286 aa14.41□□□□□ -0.1
TIMP3-201ENST00000266085 PPP2CBP62714 309 aa14.41□□□□□ -0.1
TIMP3-201ENST00000266085 PPP2CAP67775 309 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms