RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 DOCK4Q8N1I0 1966 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 C4orf47A7E2U8 309 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 H3BSH0 61 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 EIF1AYO14602 144 aaKnown RBP13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 DCKP27707 260 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 GNALP38405 381 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 MTNR1AP48039 350 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 KRR1Q13601 381 aaKnown RBP13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 TCEAL6Q6IPX3 200 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 ZNF836Q6ZNA1 936 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 TCEAL3Q969E4 200 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 CTSFQ9UBX1 484 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 LAMP5Q9UJQ1 280 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 NPIPA2E9PIF3 369 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 NPIPA3F8WFD2 350 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 HNRNPCP07910 306 aaKnown RBP eCLIP13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 PRKCAP17252 672 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 RAB39AQ14964 217 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 ARHGAP11BQ3KRB8 267 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 ALG10Q5BKT4 473 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 ERI1Q8IV48 349 aaKnown RBP13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 LMF2Q9BU23 707 aaKnown RBP13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 SLAMF7Q9NQ25 335 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 DDX28Q9NUL7 540 aaKnown RBP13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 IER3IP1Q9Y5U9 82 aa13.42□□□□□ -0.26
PDLIM2-201ENST00000265810 TCRBV5S2A0A599 114 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 KCNK2O95069 426 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 ZNF28P17035 718 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 CELP19835 753 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 GIPRP48546 466 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 ODF4Q2M2E3 257 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 UBE3DQ7Z6J8 389 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 LRRC56Q8IYG6 542 aaPredicted RBP13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 ANKK1Q8NFD2 765 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 DDIT4LQ96D03 193 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 NEK6Q9HC98 313 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 THSD1Q9NS62 852 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 EXOSC1Q9Y3B2 195 aaKnown RBP13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 CNOT1A5YKK6 2376 aaKnown RBP13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 A0A087WV62 115 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 A0A1B0GWA3 101 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 C2orf72A6NCS6 295 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 CLDN24A6NM45 220 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 G3V3Y1 287 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 PLOD3O60568 738 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 LGI1O95970 557 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 F10P00742 488 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 NR2C1P13056 603 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 CHMP24386 653 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 CLRN1P58418 232 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 MAD2L1BPQ15013 274 aaPredicted RBP13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 LEG1Q6P5S2 330 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 C6orf15Q6UXA7 325 aaPredicted RBP13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 UBE2J2Q8N2K1 259 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 GOT1L1Q8NHS2 421 aaPredicted RBP13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 OR5B2Q96R09 309 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 CHST8Q9H2A9 424 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 EGLN3Q9H6Z9 239 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 ABCB9Q9NP78 766 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 SLC22A31A6NKX4 558 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 PRKAR1AP10644 381 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 ELAVL4P26378 380 aaKnown RBP13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 DNASE1L1P49184 302 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 MRPS15P82914 257 aaKnown RBP13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 TLE3Q04726 772 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 CMPK2Q5EBM0 449 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 UGT2A3Q6UWM9 527 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 PSD4Q8NDX1 1056 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 UBAP1Q9NZ09 502 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 RNF6Q9Y252 685 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 KCNE3Q9Y6H6 103 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 CDH10Q9Y6N8 788 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 SCN3AQ9NY46 2000 aa13.41□□□□□ -0.26
PDLIM2-201ENST00000265810 CLCA1A8K7I4 914 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 IGHEP01854 428 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 SPARCP09486 303 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 NID1P14543 1247 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 PYDC2Q56P42 97 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 PRAMEF8Q5VWM4 474 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 PRAMEF7Q5VXH5 474 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 MARCH3Q86UD3 253 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 MARCH9Q86YJ5 346 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 TRUB1Q8WWH5 349 aaKnown RBP13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 C12orf43Q96C57 262 aaKnown RBP13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 PHOX2BQ99453 314 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 NIPSNAP1Q9BPW8 284 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 KCNS3Q9BQ31 491 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 ORAI3Q9BRQ5 295 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 DCSTAMPQ9H295 470 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 PTTG2Q9NZH5 202 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 SHISA7A6NL88 538 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 OR2T1O43869 369 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 CD2P06729 351 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 ACP2P11117 423 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 SPTBP11277 2137 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 LSSP48449 732 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 PRPS1P60891 318 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 APOFQ13790 326 aa13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 SNRNP27Q8WVK2 155 aaKnown RBP13.4□□□□□ -0.26
PDLIM2-201ENST00000265810 S100ZQ8WXG8 99 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms