RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 CENPAP49450 140 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 RPS13P62277 151 aaKnown RBP12.25□□□□□ -0.45
NUP54-201ENST00000264883 MICBQ29980 383 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 UAP1L1Q3KQV9 507 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 CCDC157Q569K6 752 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 FAM71E1Q6IPT2 247 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 SLC25A25Q6KCM7 469 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 MTFR2Q6P444 385 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 PRSS55Q6UWB4 352 aaPredicted RBP12.25□□□□□ -0.45
NUP54-201ENST00000264883 THAP4Q8WY91 577 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 KAT2AQ92830 837 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 ELP4Q96EB1 424 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 MED8Q96G25 268 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 ZNF251Q9BRH9 671 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 PDCD10Q9BUL8 212 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 SLC25A32Q9H2D1 315 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 GAREM1Q9H706 876 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 A4GALTQ9NPC4 353 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 MARK1Q9P0L2 795 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 LSM7Q9UK45 103 aaKnown RBP12.25□□□□□ -0.45
NUP54-201ENST00000264883 PRKAB1Q9Y478 270 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 PTPRSQ13332 1948 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 C5orf58C9J3I9 102 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 GATCO43716 136 aaKnown RBP12.25□□□□□ -0.45
NUP54-201ENST00000264883 PRAMEF2O60811 474 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 OR2A4O95047 310 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 ZNF806P0C7X5 589 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 CPN1P15169 458 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 PSMB1P20618 241 aaKnown RBP12.25□□□□□ -0.45
NUP54-201ENST00000264883 MMP11P24347 488 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 GKP32189 559 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 RAD52P43351 418 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 POLR2LP62875 67 aaKnown RBP12.25□□□□□ -0.45
NUP54-201ENST00000264883 MELKQ14680 651 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 SYTL3Q4VX76 610 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 RPS26P11Q5JNZ5 115 aaPredicted RBP12.25□□□□□ -0.45
NUP54-201ENST00000264883 TPGS2Q68CL5 300 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 SMARCD3Q6STE5 483 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 CD300LDQ6UXZ3 194 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 SLC16A13Q7RTY0 426 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 TECPR1Q7Z6L1 1165 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 RBM45Q8IUH3 476 aaKnown RBP12.25□□□□□ -0.45
NUP54-201ENST00000264883 CPXM2Q8N436 756 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 RELL2Q8NC24 303 aaPredicted RBP12.25□□□□□ -0.45
NUP54-201ENST00000264883 GPR156Q8NFN8 814 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 OR10K1Q8NGX5 313 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 OR52N1Q8NH53 320 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 C2CD4CQ8TF44 421 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 TCEAL3Q969E4 200 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 TMEM159Q96B96 161 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 TCEAL4Q96EI5 215 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 OR2A7Q96R45 310 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 CMSS1Q9BQ75 279 aaKnown RBP12.25□□□□□ -0.45
NUP54-201ENST00000264883 BTBD1Q9H0C5 482 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 NFKBIL1Q9UBC1 381 aaPredicted RBP12.25□□□□□ -0.45
NUP54-201ENST00000264883 NINQ8N4C6 2090 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 A0A1W2PRB8 838 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 DISC1C4P0D8 188 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 ARPC1BO15143 372 aaKnown RBP12.24□□□□□ -0.45
NUP54-201ENST00000264883 ADAM12O43184 909 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 GREM1O60565 184 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 EIF1BO60739 113 aaKnown RBP12.24□□□□□ -0.45
NUP54-201ENST00000264883 AQP8O94778 261 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 SPDEFO95238 335 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 SMIM6P0DI80 62 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 SPP1P10451 314 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 IFNGR1P15260 489 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 MST1P26927 711 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 SOAT1P35610 550 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 EIF1P41567 113 aaKnown RBP12.24□□□□□ -0.45
NUP54-201ENST00000264883 CDH11P55287 796 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 PAN3Q58A45 887 aaKnown RBP12.24□□□□□ -0.45
NUP54-201ENST00000264883 FAM69AQ5T7M9 428 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 PODNL1Q6PEZ8 512 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 ZC3H14Q6PJT7 736 aaKnown RBP12.24□□□□□ -0.45
NUP54-201ENST00000264883 LRRN1Q6UXK5 716 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 NHLRC1Q6VVB1 395 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 SLCO4C1Q6ZQN7 724 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 COMMD6Q7Z4G1 85 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 TMCO2Q7Z6W1 182 aaPredicted RBP12.24□□□□□ -0.45
NUP54-201ENST00000264883 HORMAD2Q8N7B1 307 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 POGLUT1Q8NBL1 392 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 GPR32P1Q8NGA4 272 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 FIBINQ8TAL6 211 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 C16orf78Q8WTQ4 265 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 ARL5BQ96KC2 179 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 TSNAXQ99598 290 aaKnown RBP12.24□□□□□ -0.45
NUP54-201ENST00000264883 NANSQ9NR45 359 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 SLC22A11Q9NSA0 550 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 MRPL15Q9P015 296 aaKnown RBP12.24□□□□□ -0.45
NUP54-201ENST00000264883 PCOLCE2Q9UKZ9 415 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 DTX4Q9Y2E6 619 aa12.24□□□□□ -0.45
NUP54-201ENST00000264883 FXYD6-FXYD2A0A087WZ82 144 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 KDM4EB2RXH2 506 aaPredicted RBP12.23□□□□□ -0.45
NUP54-201ENST00000264883 IGF2P01344 180 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 S100A9P06702 114 aaKnown RBP12.23□□□□□ -0.45
NUP54-201ENST00000264883 ACADLP28330 430 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 OR1D2P34982 312 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 GDNFP39905 211 aa12.23□□□□□ -0.45
NUP54-201ENST00000264883 PREPP48147 710 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms