RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 MAP2K6P52564 334 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 ATP12AP54707 1039 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 PCBP4P57723 403 aaKnown RBP12.09□□□□□ -0.47
SNX1-201ENST00000261889 TGM3Q08188 693 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 FNDC3BQ53EP0 1204 aaKnown RBP12.09□□□□□ -0.47
SNX1-201ENST00000261889 GET4Q7L5D6 327 aaPredicted RBP12.09□□□□□ -0.47
SNX1-201ENST00000261889 NUDT13Q86X67 352 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 RASSF5Q8WWW0 418 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 HERVK_113Q902F9 699 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 PRRC1Q96M27 445 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 ZNF558Q96NG5 402 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 FUZQ9BT04 418 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 RCE1Q9Y256 329 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 BACE2Q9Y5Z0 518 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 MDC1Q14676 2089 aaKnown RBP12.09□□□□□ -0.47
SNX1-201ENST00000261889 IGKV1-8A0A0C4DH67 115 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 TRDV1A0A1B0GX56 115 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 QSOX1O00391 747 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 EFCAB14O75071 495 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 SLC43A1O75387 559 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 LGI1O95970 557 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 ATF1P18846 271 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 MAKP20794 623 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 C21orf58P58505 322 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 RPE65Q16518 533 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 TRILQ7L0X0 811 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 DNAAF1Q8NEP3 725 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 OR5W2Q8NH69 310 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 TRMT2BQ96GJ1 504 aaKnown RBP12.09□□□□□ -0.47
SNX1-201ENST00000261889 MRGPRX3Q96LB0 322 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 HYLS1Q96M11 299 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 LINC00052Q96N35 136 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 OR14A2Q96R54 314 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 KCNN2Q9H2S1 579 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 UBQLN3Q9H347 655 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 SPHK2Q9NRA0 654 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 CA10Q9NS85 328 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 SPHK1Q9NYA1 384 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 KCNN3Q9UGI6 736 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 FREM2Q5SZK8 3169 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 DOK2O60496 412 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 LILRB5O75023 590 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 AIFM1O95831 613 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 FGBP02675 491 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 ANXA7P20073 488 aaKnown RBP12.09□□□□□ -0.47
SNX1-201ENST00000261889 NPR2P20594 1047 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 OMPP47874 163 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 PITPNBP48739 271 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 RGS19P49795 217 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 TSPAN5P62079 268 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 MAPK14Q16539 360 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 PLA1AQ53H76 456 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 FAM46CQ5VWP2 391 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 CREB3L2Q70SY1 520 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 GDF7Q7Z4P5 450 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 SPERTQ8NA61 448 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 DUSP18Q8NEJ0 188 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 PIGXQ8TBF5 258 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 OTUB2Q96DC9 234 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 LMLNQ96KR4 655 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 AIF1LQ9BQI0 150 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 GTPBP2Q9BX10 602 aaKnown RBP12.09□□□□□ -0.47
SNX1-201ENST00000261889 CPEB1Q9BZB8 566 aaKnown RBP12.09□□□□□ -0.47
SNX1-201ENST00000261889 SLC38A1Q9H2H9 487 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 KCNK15Q9H427 330 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 TAS2R7Q9NYW3 318 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 TMEM129A0AVI4 362 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 CDHR4A6H8M9 788 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 RPP14O95059 124 aaKnown RBP12.08□□□□□ -0.48
SNX1-201ENST00000261889 PAK4O96013 591 aaPredicted RBP12.08□□□□□ -0.48
SNX1-201ENST00000261889 BCL6P41182 706 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 ZP1P60852 638 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 RPS15P62841 145 aaKnown RBP12.08□□□□□ -0.48
SNX1-201ENST00000261889 GRK1Q15835 563 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 PGGHGQ32M88 737 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 TMEM240Q5SV17 173 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 C12orf76Q8N812 135 aaPredicted RBP12.08□□□□□ -0.48
SNX1-201ENST00000261889 ZNF485Q8NCK3 441 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 SUN3Q8TAQ9 357 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 GHSRQ92847 366 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 ZNF707Q96C28 371 aaPredicted RBP12.08□□□□□ -0.48
SNX1-201ENST00000261889 DTD2Q96FN9 168 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 PTCHD1Q96NR3 888 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 FOXN4Q96NZ1 517 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 KCNJ15Q99712 375 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 ZNF649Q9BS31 505 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 OR52D1Q9H346 318 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 URB1O60287 2271 aaKnown RBP12.08□□□□□ -0.48
SNX1-201ENST00000261889 A0A1B0GTH9 108 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 IGLON5A6NGN9 336 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 PROM1O43490 865 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 PPP1R3DO95685 299 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 TAS2R38P59533 333 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 RGS1Q08116 209 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 AADACL4Q5VUY2 407 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 CDC73Q6P1J9 531 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 MZT2AQ6P582 158 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 AMZ2Q86W34 360 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 SDR9C7Q8NEX9 313 aa12.08□□□□□ -0.48
SNX1-201ENST00000261889 NUP43Q8NFH3 380 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms