RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 GPR139Q6DWJ6 353 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 TMEM53Q6P2H8 277 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 OR4M2Q8NGB6 313 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 SFXN5Q8TD22 340 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 FGF13Q92913 245 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 MYADMQ96S97 322 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 USB1Q9BQ65 265 aaKnown RBP11.37□□□□□ -0.59
COL8A1-201ENST00000261037 TBCCD1Q9NVR7 557 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 PLEK2Q9NYT0 353 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 TMEM181Q9P2C4 612 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 DNAJB11Q9UBS4 358 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 ANKRD30BLA7E2S9 258 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 RGRP47804 291 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 SLC6A8P48029 635 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 POLR2HP52434 150 aaKnown RBP11.36□□□□□ -0.59
COL8A1-201ENST00000261037 CLDN10P78369 228 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 CPZQ66K79 652 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 FBXO46Q6PJ61 603 aaPredicted RBP11.36□□□□□ -0.59
COL8A1-201ENST00000261037 SLC39A11Q8N1S5 342 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 TEX10Q9NXF1 929 aaPredicted RBP11.36□□□□□ -0.59
COL8A1-201ENST00000261037 ZDHHC7Q9NXF8 308 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 F5H5P2 479 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 HPGDSO60760 199 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 ARHGEF15O94989 841 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 MT-ND4P03905 459 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 SERPINA2P20848 420 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 CSNK1A1P48729 337 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 OR9A4Q8NGU2 314 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 TRUB1Q8WWH5 349 aaKnown RBP11.36□□□□□ -0.59
COL8A1-201ENST00000261037 IL1F10Q8WWZ1 152 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 TANKQ92844 425 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 SLC29A1Q99808 456 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 SAP130Q9H0E3 1048 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 CBLCQ9ULV8 474 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 CACNG2Q9Y698 323 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 A6NIZ1 184 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 DRGXA6NNA5 263 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 ARPC5O15511 151 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 UGDHO60701 494 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 SNAPC5O75971 98 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 C1orf105O95561 183 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 BMP2P12643 396 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 AGTR1P30556 359 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 PRSS3P35030 304 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 RAP1BP61224 184 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 RAP1AP62834 184 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 LDLRAD1Q5T700 205 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 KIAA1211LQ6NV74 962 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 CCDC71LQ8N9Z2 235 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 CLEC1AQ8NC01 280 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 CNOT11Q9UKZ1 510 aaKnown RBP11.36□□□□□ -0.59
COL8A1-201ENST00000261037 FAM183AA6NL82 134 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 MYH3P11055 1940 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 OPRL1P41146 370 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 OR1D4P47884 311 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 ZNF33BQ06732 778 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 HNRNPA1L2Q32P51 320 aaKnown RBP11.36□□□□□ -0.59
COL8A1-201ENST00000261037 HORMAD2Q8N7B1 307 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 TEX19Q8NA77 164 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 DEDD2Q8WXF8 326 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 ZNF775Q96BV0 537 aaPredicted RBP11.36□□□□□ -0.59
COL8A1-201ENST00000261037 ZNF300Q96RE9 604 aaPredicted RBP11.36□□□□□ -0.59
COL8A1-201ENST00000261037 EFCAB7A8K855 629 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 H3BMQ9 156 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 DOK2O60496 412 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 TFP02787 698 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 CTBSQ01459 385 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 CHRNEQ04844 493 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 MOB3CQ70IA8 216 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 VASH1Q7L8A9 365 aaPredicted RBP11.36□□□□□ -0.59
COL8A1-201ENST00000261037 EID2Q8N6I1 236 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 BPIFA2Q96DR5 249 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 COG8Q96MW5 612 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 SYT3Q9BQG1 590 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 SMIM3Q9BZL3 60 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 SDR39U1Q9NRG7 319 aaPredicted RBP11.36□□□□□ -0.59
COL8A1-201ENST00000261037 CPNE7Q9UBL6 633 aa11.36□□□□□ -0.59
COL8A1-201ENST00000261037 ARGFXA6NJG6 315 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 KDM4EB2RXH2 506 aaPredicted RBP11.35□□□□□ -0.59
COL8A1-201ENST00000261037 AGPAT2O15120 278 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 RPS17P08708 135 aaKnown RBP11.35□□□□□ -0.59
COL8A1-201ENST00000261037 ARSBP15848 533 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 ABOP16442 354 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 CA5AP35218 305 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 AHRP35869 848 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 NOVP48745 357 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 ZNF136P52737 540 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 ERVK-16P61578 105 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 VASNQ6EMK4 673 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 PODNL1Q6PEZ8 512 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 IL20RBQ6UXL0 311 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 PDZD9Q8IXQ8 264 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 METTL25Q8N6Q8 603 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 FNDC8Q8TC99 324 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 STK35Q8TDR2 534 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 INTS14Q96SY0 518 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 PRDM9Q9NQV7 894 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 INIPQ9NRY2 104 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 PLCH1Q4KWH8 1693 aa11.35□□□□□ -0.59
COL8A1-201ENST00000261037 ARPC1BO15143 372 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms