RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 COQ7Q99807 217 aa12.58□□□□□ -0.4
VHL-201ENST00000256474 ORAI3Q9BRQ5 295 aa12.58□□□□□ -0.4
VHL-201ENST00000256474 THAP7Q9BT49 309 aaPredicted RBP12.58□□□□□ -0.4
VHL-201ENST00000256474 TBC1D29Q9UFV1 150 aa12.58□□□□□ -0.4
VHL-201ENST00000256474 ZNF443Q9Y2A4 671 aaPredicted RBP12.58□□□□□ -0.4
VHL-201ENST00000256474 SF3B6Q9Y3B4 125 aaKnown RBP12.58□□□□□ -0.4
VHL-201ENST00000256474 TMEM129A0AVI4 362 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 SSNA1O43805 119 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 SLC35G6P0C7Q6 338 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 MAKP20794 623 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 GDI1P31150 447 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 EVX1P49640 407 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 CLDN12P56749 244 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 CRMP1Q14194 572 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 KIAA1211LQ6NV74 962 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 ZNF836Q6ZNA1 936 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 LRRC25Q8N386 305 aaPredicted RBP12.57□□□□□ -0.4
VHL-201ENST00000256474 METTL27Q8N6F8 245 aaPredicted RBP12.57□□□□□ -0.4
VHL-201ENST00000256474 TOX2Q96NM4 488 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 GSDMCQ9BYG8 508 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 ACSL5Q9ULC5 683 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 CBLCQ9ULV8 474 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 UNC119BA6NIH7 251 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 FABP7O15540 132 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 RPP14O95059 124 aaKnown RBP12.57□□□□□ -0.4
VHL-201ENST00000256474 THY1P04216 161 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 CPMP14384 443 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 GJA4P35212 333 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 SHC2P98077 582 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 RGS1Q08116 209 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 ARHGAP19Q14CB8 494 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 NTRK2Q16620 822 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 ZNF628Q5EBL2 1059 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 SFRP4Q6FHJ7 346 aaPredicted RBP12.57□□□□□ -0.4
VHL-201ENST00000256474 ZNF620Q6ZNG0 422 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 NRROSQ86YC3 692 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 C17orf47Q8NEP4 570 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 OR4K14Q8NGD5 310 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 OR5W2Q8NH69 310 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 OR4C6Q8NH72 309 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 TRMT10AQ8TBZ6 339 aaKnown RBP12.57□□□□□ -0.4
VHL-201ENST00000256474 CD93Q9NPY3 652 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 MN1Q10571 1320 aaPredicted RBP12.57□□□□□ -0.4
VHL-201ENST00000256474 FAM86C2PA6NEL3 165 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 CACNB4O00305 520 aaPredicted RBP12.57□□□□□ -0.4
VHL-201ENST00000256474 RNF13O43567 381 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 TYRP1P17643 537 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 RPE65Q16518 533 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 NDUFAF6Q330K2 333 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 PRRT3Q5FWE3 981 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 CEP78Q5JTW2 689 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 KIAA1324Q6UXG2 1013 aaKnown RBP12.57□□□□□ -0.4
VHL-201ENST00000256474 NR2C2APQ86WQ0 139 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 LRRC17Q8N6Y2 441 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 OR5H6Q8NGV6 325 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 RFT1Q96AA3 541 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 SLC25A18Q9H1K4 315 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 SLC28A3Q9HAS3 691 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 MARK1Q9P0L2 795 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 ACAD8Q9UKU7 415 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 NCKAP1Q9Y2A7 1128 aa12.57□□□□□ -0.4
VHL-201ENST00000256474 FGF19O95750 216 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 PTHLHP12272 177 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 GIFP27352 417 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 ZNF155Q12901 538 aaPredicted RBP12.56□□□□□ -0.4
VHL-201ENST00000256474 GPR176Q14439 515 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 LYPD4Q6UWN0 246 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 TMEM91Q6ZNR0 172 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 ETFBKMTQ8IXQ9 262 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 NATD1Q8N6N6 113 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 ZNF707Q96C28 371 aaPredicted RBP12.56□□□□□ -0.4
VHL-201ENST00000256474 WDFY2Q96P53 400 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 SIDT1Q9NXL6 827 aaKnown RBP12.56□□□□□ -0.4
VHL-201ENST00000256474 FREM2Q5SZK8 3169 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 TRDV1A0A1B0GX56 115 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 EFCAB14O75071 495 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 MT-ND4P03905 459 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 HSD17B2P37059 387 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 BNC1Q01954 994 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 MAB21L1Q13394 359 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 ANKRD54Q6NXT1 300 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 WDR88Q6ZMY6 472 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 OAFQ86UD1 273 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 RANBP3LQ86VV4 465 aaPredicted RBP12.56□□□□□ -0.4
VHL-201ENST00000256474 RDH10Q8IZV5 341 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 RFLNBQ8N5W9 214 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 OR52E2Q8NGJ4 325 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 RPP25Q9BUL9 199 aaKnown RBP12.56□□□□□ -0.4
VHL-201ENST00000256474 SLC17A9Q9BYT1 436 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 BABAM2Q9NXR7 383 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 SPATA2Q9UM82 520 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 MRPS2Q9Y399 296 aaKnown RBP12.56□□□□□ -0.4
VHL-201ENST00000256474 DENND4CQ5VZ89 1909 aa12.56□□□□□ -0.4
VHL-201ENST00000256474 GXYLT2A0PJZ3 443 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 SLC9B1P1A6NJY1 282 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 CASC3O15234 703 aaKnown RBP12.55□□□□□ -0.4
VHL-201ENST00000256474 OR10H2O60403 315 aa12.55□□□□□ -0.4
VHL-201ENST00000256474 RGS9O75916 674 aaPredicted RBP12.55□□□□□ -0.4
VHL-201ENST00000256474 TLX1P31314 330 aaPredicted RBP12.55□□□□□ -0.4
VHL-201ENST00000256474 ERV3-1Q14264 604 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms