RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 NOL3O60936 208 aaKnown RBP21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 ADAM11O75078 769 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 SCRG1O75711 98 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 GALNSP34059 522 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 IFNGR2P38484 337 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 EFNB1P98172 346 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 SERTAD2Q14140 314 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 IRF3Q14653 427 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 OR1Q1Q15612 314 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 MINDY4Q4G0A6 757 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 RHBDD2Q6NTF9 364 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 CASP12Q6UXS9 341 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 SHISA6Q6ZSJ9 500 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 MBOAT2Q6ZWT7 520 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 NAXDQ8IW45 347 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 OR8J1Q8NGP2 316 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 PTPMT1Q8WUK0 201 aaPredicted RBP21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 CNOT9Q92600 299 aaKnown RBP21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 ZNF578Q96N58 590 aaPredicted RBP21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 ITPAQ9BY32 194 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 TVP23BQ9NYZ1 205 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 DNAJC27Q9NZQ0 273 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 RARRES3Q9UL19 164 aa21.56■■□□□ 1.04
SYNGR3-201ENST00000248121 IGKV3D-11A0A0A0MRZ8 115 aa21.55■■□□□ 1.04
SYNGR3-201ENST00000248121 CCL4P13236 92 aa21.55■■□□□ 1.04
SYNGR3-201ENST00000248121 DRD5P21918 477 aa21.55■■□□□ 1.04
SYNGR3-201ENST00000248121 TRAPPC13A5PLN9 417 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 NPIPB9F8W1W9 429 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 CBFA2T3O75081 653 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 ZNF182P17025 639 aaPredicted RBP21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 GPR4P46093 362 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 OCA2Q04671 838 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 RASSF6Q6ZTQ3 369 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 RRM2BQ7LG56 351 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 STX19Q8N4C7 294 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 ZNF321PQ8N8H1 164 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 BMPERQ8N8U9 685 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 TOR1AIP2Q8NFQ8 470 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 OR1F2PQ96R84 312 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 POLDIP3Q9BY77 421 aaKnown RBP21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 TAS2R16Q9NYV7 291 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 CNOT2Q9NZN8 540 aaKnown RBP21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 C17orf105B2RV13 164 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 FMO6PO60774 539 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 GABARAPO95166 117 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 FPR3P25089 353 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 PCYT1AP49585 367 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 SPCS2Q15005 226 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 LCN10Q6JVE6 187 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 MESP1Q9BRJ9 268 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 SLC7A5P2Q9GIP4 190 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 MMACHCQ9Y4U1 282 aa21.54■■□□□ 1.04
SYNGR3-201ENST00000248121 M0R082 166 aa21.53■■□□□ 1.04
SYNGR3-201ENST00000248121 PRKNO60260 465 aaPredicted RBP21.53■■□□□ 1.04
SYNGR3-201ENST00000248121 GP1BAP07359 652 aa21.53■■□□□ 1.04
SYNGR3-201ENST00000248121 TGFBR2P37173 567 aa21.53■■□□□ 1.04
SYNGR3-201ENST00000248121 ST13P50502 369 aaKnown RBP21.53■■□□□ 1.04
SYNGR3-201ENST00000248121 MRGPREQ86SM8 312 aa21.53■■□□□ 1.04
SYNGR3-201ENST00000248121 ZNF614Q8N883 585 aa21.53■■□□□ 1.04
SYNGR3-201ENST00000248121 SENP5Q96HI0 755 aaPredicted RBP21.53■■□□□ 1.04
SYNGR3-201ENST00000248121 PELOQ9BRX2 385 aaKnown RBP21.53■■□□□ 1.04
SYNGR3-201ENST00000248121 POLR2J2Q9GZM3 115 aaKnown RBP21.53■■□□□ 1.04
SYNGR3-201ENST00000248121 AKIRIN1Q9H9L7 192 aaPredicted RBP21.53■■□□□ 1.04
SYNGR3-201ENST00000248121 Q9N2J8 555 aa21.53■■□□□ 1.04
SYNGR3-201ENST00000248121 TESQ9UGI8 421 aaKnown RBP21.53■■□□□ 1.04
SYNGR3-201ENST00000248121 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.53■■□□□ 1.04
SYNGR3-201ENST00000248121 EFCAB10A6NFE3 127 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 CDC42EP2O14613 210 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 PTHP01270 115 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 ADORA3P0DMS8 318 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 ZNF28P17035 718 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 RHAGQ02094 409 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 OCLNQ16625 522 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 FAM26EQ8N5C1 309 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 BCORP1Q8N888 145 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 LMF1Q96S06 567 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 PHOX2BQ99453 314 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 PNO1Q9NRX1 252 aaKnown RBP21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 DNAJB12Q9NXW2 375 aaKnown RBP21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 ZNF223Q9UK11 482 aaPredicted RBP21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 SRPK3Q9UPE1 567 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 C4orf47A7E2U8 309 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 A8MUA0 341 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 TLX2O43763 284 aaPredicted RBP21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 CSTF2P33240 577 aaKnown RBP eCLIP21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 LIPAP38571 399 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 SMSP52788 366 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 ZNF141Q15928 474 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 YOD1Q5VVQ6 348 aaPredicted RBP21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 ZNF385CQ66K41 422 aaPredicted RBP21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 QSOX2Q6ZRP7 698 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 PPP1R3BQ86XI6 285 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 GRAMD2AQ8IUY3 354 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 CACTIN-AS1Q8N1I8 211 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 FCGR1BQ92637 280 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 CLIP3Q96DZ5 547 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 CBLCQ9ULV8 474 aa21.52■■□□□ 1.04
SYNGR3-201ENST00000248121 PMS2P1A4D2B8 440 aa21.51■■□□□ 1.03
SYNGR3-201ENST00000248121 CDK4P11802 303 aa21.51■■□□□ 1.03
SYNGR3-201ENST00000248121 PIPP12273 146 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms