RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 METTL21AQ8WXB1 218 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 DIO2Q92813 273 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 TP53INP1Q96A56 240 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 CLIP3Q96DZ5 547 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 MPP4Q96JB8 637 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 LCORQ96JN0 433 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-201ENST00000238688 HS6ST2Q96MM7 605 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 MUS81Q96NY9 551 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 YIPF2Q9BWQ6 316 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 RBCK1Q9BYM8 510 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 PRRG3Q9BZD7 231 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 VN1R1Q9GZP7 353 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 IL17BQ9UHF5 180 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 MKLN1Q9UL63 735 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 OR10H1Q9Y4A9 318 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 GMPPBQ9Y5P6 360 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 MAU2Q9Y6X3 613 aa12.18□□□□□ -0.46
SLIRP-201ENST00000238688 TRAPPC13A5PLN9 417 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 TERTO14746 1132 aaKnown RBP12.17□□□□□ -0.46
SLIRP-201ENST00000238688 NKX2-8O15522 239 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 ABCB7O75027 752 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 CYP7B1O75881 506 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 SMNDC1O75940 238 aaKnown RBP eCLIP12.17□□□□□ -0.46
SLIRP-201ENST00000238688 IL33O95760 270 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 DDAH2O95865 285 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 EPPINO95925 133 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 GNAO1P09471 354 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 ZGLP1P0C6A0 271 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 TNFRSF1BP20333 461 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 PRKACGP22612 351 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 SSTR4P31391 388 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 PTGER1P34995 402 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 CDC42P60953 191 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 ISL1P61371 349 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 FGFBP1Q14512 234 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 FGD3Q5JSP0 725 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 MFSD4BQ5TF39 518 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 HLA-DQA1Q5Y7H0 255 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 PWWP2BQ6NUJ5 590 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 C1orf94Q6P1W5 598 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 BORAQ6PGQ7 559 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 ZNF836Q6ZNA1 936 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 COX15Q7KZN9 410 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 SLC29A4Q7RTT9 530 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 VRK2Q86Y07 508 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 ZNF786Q8N393 782 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 SLC7A13Q8TCU3 470 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 SLC2A12Q8TD20 617 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 ZNF721Q8TF20 911 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 TRUB1Q8WWH5 349 aaKnown RBP12.17□□□□□ -0.46
SLIRP-201ENST00000238688 ACOT11Q8WXI4 607 aaPredicted RBP12.17□□□□□ -0.46
SLIRP-201ENST00000238688 UCK2Q9BZX2 261 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 TRIM2Q9C040 744 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 ANKRA2Q9H9E1 313 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 EXOSC3Q9NQT5 275 aaKnown RBP12.17□□□□□ -0.46
SLIRP-201ENST00000238688 UBQLN4Q9NRR5 601 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 MKL2Q9ULH7 1088 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 TMEM5Q9Y2B1 443 aa12.17□□□□□ -0.46
SLIRP-201ENST00000238688 C2orf92A0A1B0GVN3 265 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 A0A1W2PQD3 144 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 C9J4A7 227 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 PYCARD-AS1I3L0S3 204 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 M0R3H8 397 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 OR10H3O60404 316 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 NME6O75414 186 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-201ENST00000238688 TIAF1O95411 115 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 IGF2P01344 180 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 IGHEP01854 428 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 CLPSP04118 112 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 OSMP13725 252 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 GGT2P36268 569 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 RBM34P42696 430 aaKnown RBP12.16□□□□□ -0.46
SLIRP-201ENST00000238688 PGDP52209 483 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 SH3BGRP55822 239 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-201ENST00000238688 GPR68Q15743 365 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 ZIK1Q3SY52 487 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-201ENST00000238688 ENTPD8Q5MY95 495 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 C6orf141Q5SZD1 244 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 MRPL2Q5T653 305 aaKnown RBP12.16□□□□□ -0.46
SLIRP-201ENST00000238688 RPL13AP3Q6NVV1 102 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 DGAT2L6Q6ZPD8 337 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 PLEKHM3Q6ZWE6 761 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 RRM2BQ7LG56 351 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 METTL27Q8N6F8 245 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-201ENST00000238688 CLDN22Q8N7P3 220 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 LSMEM1Q8N8F7 131 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 ZSCAN1Q8NBB4 408 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 AQP11Q8NBQ7 271 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 VANGL1Q8TAA9 524 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-201ENST00000238688 NUBPLQ8TB37 319 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 IPCEF1Q8WWN9 437 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-201ENST00000238688 PIK3R3Q92569 461 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 NACC2Q96BF6 587 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 MCHR1Q99705 422 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 TEX12Q9BXU0 123 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 RIBC2Q9H4K1 309 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 PNO1Q9NRX1 252 aaKnown RBP12.16□□□□□ -0.46
SLIRP-201ENST00000238688 TPRKBQ9Y3C4 175 aa12.16□□□□□ -0.46
SLIRP-201ENST00000238688 SETXQ7Z333 2677 aaKnown RBP12.15□□□□□ -0.46
SLIRP-201ENST00000238688 TRBV4-1A0A0J9YWV2 114 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms