RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 B3GNT3Q9Y2A9 372 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 HOXB5P09067 269 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 APEHP13798 732 aaKnown RBP10.49□□□□□ -0.73
MSH6-201ENST00000234420 MYOGP15173 224 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 DNAJB1P25685 340 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 SOX3P41225 446 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 ETV4P43268 484 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 MLF1P58340 268 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 ERVK-16P61578 105 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 FLI1Q01543 452 aaPredicted RBP10.49□□□□□ -0.73
MSH6-201ENST00000234420 ARL16Q0P5N6 197 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 IL17AQ16552 155 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 DEFB109BQ30KR1 87 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 NANOGP8Q6NSW7 305 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 MBOAT1Q6ZNC8 495 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 C6orf120Q7Z4R8 191 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 XYLT1Q86Y38 959 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 OR51A7Q8NH64 312 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 ELP4Q96EB1 424 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 HCFC1R1Q9NWW0 138 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 EXO1Q9UQ84 846 aaKnown RBP10.49□□□□□ -0.73
MSH6-201ENST00000234420 GDF5P43026 501 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 SOHLH1Q5JUK2 328 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 C6orf89Q6UWU4 347 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 IL20RBQ6UXL0 311 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 TMEM139Q8IV31 216 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 FOXJ1Q92949 421 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 TOE1Q96GM8 510 aaKnown RBP10.49□□□□□ -0.73
MSH6-201ENST00000234420 NKX6-2Q9C056 277 aaPredicted RBP10.49□□□□□ -0.73
MSH6-201ENST00000234420 FNIP2Q9P278 1114 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 ASXL3Q9C0F0 2248 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 A0A0G2JLL6 359 aaPredicted RBP10.49□□□□□ -0.73
MSH6-201ENST00000234420 TCAPO15273 167 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 XRCC3O43542 346 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 CPT2P23786 658 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 NDUFS1P28331 727 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 P2RX1P51575 399 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 TAS2R30P59541 319 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 HMGN3Q15651 99 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 SLC46A3Q7Z3Q1 461 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 PRRT2Q7Z6L0 340 aaPredicted RBP10.49□□□□□ -0.73
MSH6-201ENST00000234420 LACC1Q8IV20 430 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 STT3BQ8TCJ2 826 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 ZNF582Q96NG8 517 aaPredicted RBP10.49□□□□□ -0.73
MSH6-201ENST00000234420 KCNK2O95069 426 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 NTF3P20783 257 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 ADRA1BP35368 520 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 THBS2P35442 1172 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 OR2B8PP59922 312 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 MBTPS1Q14703 1052 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 VWA2Q5GFL6 755 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 C17orf107Q6ZR85 190 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 RHOUQ7L0Q8 258 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 ZBTB8AQ96BR9 441 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 NUDT22Q9BRQ3 303 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 TMPRSS5Q9H3S3 457 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 ABRACLQ9P1F3 81 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 CICQ96RK0 1608 aaPredicted RBP10.49□□□□□ -0.73
MSH6-201ENST00000234420 A0A0D9SEW6 157 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 GPR37L1O60883 481 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 ESR1P03372 595 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 RHOQP17081 205 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 SOX9P48436 509 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 GABARAPL2P60520 117 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 SLC14A1Q13336 389 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 ZDHHC24Q6UX98 284 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 STRADAQ7RTN6 431 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 FAM122BQ7Z309 247 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 SAMD14Q8IZD0 417 aaPredicted RBP10.49□□□□□ -0.73
MSH6-201ENST00000234420 OR5D16Q8NGK9 328 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 DDIT4LQ96D03 193 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 CDKN2AIPNLQ96HQ2 116 aa10.49□□□□□ -0.73
MSH6-201ENST00000234420 TCRBV7S3A2A0A539 114 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 TERTO14746 1132 aaKnown RBP10.48□□□□□ -0.73
MSH6-201ENST00000234420 BCAT2O15382 392 aaPredicted RBP10.48□□□□□ -0.73
MSH6-201ENST00000234420 DEFB134Q4QY38 66 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 SIRPB2Q5JXA9 342 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 NIPA1Q7RTP0 329 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 TRAM1L1Q8N609 369 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 RSPRY1Q96DX4 576 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 TXNDC15Q96J42 360 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 RXFP3Q9NSD7 469 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 KLRC4O43908 158 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 PRAF2O60831 178 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 LILRB3O75022 631 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 CSTAP01040 98 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 TPOP07202 933 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 SPATA31C1P0DKV0 1188 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 ETFAP13804 333 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 CD46P15529 392 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 USF1P22415 310 aaPredicted RBP10.48□□□□□ -0.73
MSH6-201ENST00000234420 TAS2R31P59538 309 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 DSC1Q08554 894 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 EBPQ15125 230 aaKnown RBP10.48□□□□□ -0.73
MSH6-201ENST00000234420 SPIN4Q56A73 249 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 MON1BQ7L1V2 547 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 IL17RDQ8NFM7 739 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 CA5BP1Q8WTZ4 195 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 KREMEN1Q96MU8 473 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 SERINC2Q96SA4 455 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms