RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 QSOX2Q6ZRP7 698 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 NUP54Q7Z3B4 507 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 VRK2Q86Y07 508 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 RBM45Q8IUH3 476 aaKnown RBP9.87□□□□□ -0.83
CDCA3-201ENST00000229265 RCBTB1Q8NDN9 531 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 PLPP5Q8NEB5 264 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 OR9Q2Q8NGE9 314 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 WDR36Q8NI36 951 aaKnown RBP9.87□□□□□ -0.83
CDCA3-201ENST00000229265 VANGL1Q8TAA9 524 aaPredicted RBP9.87□□□□□ -0.83
CDCA3-201ENST00000229265 PIGXQ8TBF5 258 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 GTPBP3Q969Y2 492 aaKnown RBP9.87□□□□□ -0.83
CDCA3-201ENST00000229265 ZG16BQ96DA0 208 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 MMABQ96EY8 250 aaPredicted RBP9.87□□□□□ -0.83
CDCA3-201ENST00000229265 SLC46A1Q96NT5 459 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 TGM7Q96PF1 710 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 TRIM2Q9C040 744 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 TGIF2Q9GZN2 237 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 LHPPQ9H008 270 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 KLHL25Q9H0H3 589 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 ZNF768Q9H5H4 540 aaKnown RBP9.87□□□□□ -0.83
CDCA3-201ENST00000229265 TMEM27Q9HBJ8 222 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 Q9N2J8 555 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 MAN2C1Q9NTJ4 1040 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 CUTCQ9NTM9 273 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 SOHLH2Q9NX45 425 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 ERVK-18Q9QC07 812 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 SRPK3Q9UPE1 567 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 HEMK1Q9Y5R4 338 aaPredicted RBP9.87□□□□□ -0.83
CDCA3-201ENST00000229265 HEATR5BQ9P2D3 2071 aa9.87□□□□□ -0.83
CDCA3-201ENST00000229265 BAHCC1Q9P281 2608 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 EFCAB7A8K855 629 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 FAM227AF5H4B4 570 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 H3BMQ9 156 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 PYCARD-AS1I3L0S3 204 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 M0R3H8 397 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 DSCR3O14972 297 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 XPNPEP2O43895 674 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 OR2B3O76000 313 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 ZIC2O95409 532 aaPredicted RBP9.86□□□□□ -0.83
CDCA3-201ENST00000229265 CYP4B1P13584 511 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 RORAP35398 523 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 UGT2B10P36537 528 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 OMPP47874 163 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 IDH2P48735 452 aaKnown RBP9.86□□□□□ -0.83
CDCA3-201ENST00000229265 PSG6Q00889 435 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 ZFP36L1Q07352 338 aaKnown RBP9.86□□□□□ -0.83
CDCA3-201ENST00000229265 CLN3Q13286 438 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 IRF3Q14653 427 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 NEDD8Q15843 81 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 PLAG1Q6DJT9 500 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 ZNF730Q6ZMV8 503 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 GDPGP1Q6ZNW5 385 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 TMPRSS11FQ6ZWK6 438 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 PRSS41Q7RTY9 318 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 LACC1Q8IV20 430 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 CACTIN-AS1Q8N1I8 211 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 CYP4Z2PQ8N1L4 340 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 CLIP4Q8N3C7 705 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 STX19Q8N4C7 294 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 ZNF615Q8N8J6 731 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 TMEM52Q8NDY8 209 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 OR52R1Q8NGF1 315 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 OR5T3Q8NGG3 340 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 RFKQ969G6 155 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 NXPE2Q96DL1 559 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 YIPF6Q96EC8 236 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 SLC41A3Q96GZ6 507 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 COG8Q96MW5 612 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 VSTM2LQ96N03 204 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 SLC38A2Q96QD8 506 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 NDC1Q9BTX1 674 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 CCDC90BQ9GZT6 254 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 LRRN3Q9H3W5 708 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 FOLH1BQ9HBA9 442 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 HHATLQ9HCP6 504 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 ADAP2Q9NPF8 381 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 ISYNA1Q9NPH2 558 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 MKKSQ9NPJ1 570 aaPredicted RBP9.86□□□□□ -0.83
CDCA3-201ENST00000229265 EQTNQ9NQ60 294 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 RASSF1Q9NS23 344 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 PAK1IP1Q9NWT1 392 aaPredicted RBP9.86□□□□□ -0.83
CDCA3-201ENST00000229265 RHCGQ9UBD6 479 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 BAIAP2Q9UQB8 552 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 CHST2Q9Y4C5 530 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 AHCTF1Q8WYP5 2266 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 GCN1Q92616 2671 aaKnown RBP9.86□□□□□ -0.83
CDCA3-201ENST00000229265 TENM4Q6N022 2769 aa9.86□□□□□ -0.83
CDCA3-201ENST00000229265 PCSK5Q92824 1860 aa9.85□□□□□ -0.83
CDCA3-201ENST00000229265 FASNP49327 2511 aaKnown RBP9.85□□□□□ -0.83
CDCA3-201ENST00000229265 A0A1W2PS29 197 aa9.85□□□□□ -0.83
CDCA3-201ENST00000229265 OR6C76A6NM76 312 aa9.85□□□□□ -0.83
CDCA3-201ENST00000229265 TMEM150CB9EJG8 249 aa9.85□□□□□ -0.83
CDCA3-201ENST00000229265 C9orf172C9J069 976 aa9.85□□□□□ -0.83
CDCA3-201ENST00000229265 NPIPB9F8W1W9 429 aa9.85□□□□□ -0.83
CDCA3-201ENST00000229265 H3BN98 237 aa9.85□□□□□ -0.83
CDCA3-201ENST00000229265 POLR1CO15160 346 aaPredicted RBP9.85□□□□□ -0.83
CDCA3-201ENST00000229265 KLF4O43474 513 aa9.85□□□□□ -0.83
CDCA3-201ENST00000229265 HCRTR1O43613 425 aa9.85□□□□□ -0.83
CDCA3-201ENST00000229265 TPST2O60704 377 aa9.85□□□□□ -0.83
CDCA3-201ENST00000229265 DXOO77932 396 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms