RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 FRS3O43559 492 aa12.46□□□□□ -0.42
COL1A1-201ENST00000225964 RNF175Q8N4F7 328 aa12.46□□□□□ -0.42
COL1A1-201ENST00000225964 MINDY1Q8N5J2 469 aa12.46□□□□□ -0.42
COL1A1-201ENST00000225964 ACOT4Q8N9L9 421 aa12.46□□□□□ -0.42
COL1A1-201ENST00000225964 TAAR8Q969N4 342 aa12.46□□□□□ -0.42
COL1A1-201ENST00000225964 NEIL2Q969S2 332 aa12.46□□□□□ -0.42
COL1A1-201ENST00000225964 NALCNQ8IZF0 1738 aa12.46□□□□□ -0.42
COL1A1-201ENST00000225964 CD79BP40259 229 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 KLHL42Q9P2K6 505 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 ZNF443Q9Y2A4 671 aaPredicted RBP12.45□□□□□ -0.42
COL1A1-201ENST00000225964 AK6Q9Y3D8 172 aaKnown RBP12.45□□□□□ -0.42
COL1A1-201ENST00000225964 MYH10P35580 1976 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 LETMD1Q6P1Q0 360 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 OR11L1Q8NGX0 322 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 NDNFQ8TB73 568 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 NAT6Q93015 286 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 INTS14Q96SY0 518 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 UTP23Q9BRU9 249 aaKnown RBP12.45□□□□□ -0.42
COL1A1-201ENST00000225964 SLC6A5Q9Y345 797 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 SMAD6O43541 496 aaKnown RBP12.45□□□□□ -0.42
COL1A1-201ENST00000225964 TYROBPO43914 113 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 MRPL33O75394 65 aaKnown RBP12.45□□□□□ -0.42
COL1A1-201ENST00000225964 F10P00742 488 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 ACPPP15309 386 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 STT3AP46977 705 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 OR1D4P47884 311 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 NDUFAF4Q9P032 175 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 PCDHGA1Q9Y5H4 931 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 MYH13Q9UKX3 1938 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 CEBPZOSA8MTT3 80 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 UGT2B7P16662 529 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 FECHP22830 423 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 MAT1AQ00266 395 aaKnown RBP12.45□□□□□ -0.42
COL1A1-201ENST00000225964 KCTD20Q7Z5Y7 419 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 SLC39A11Q8N1S5 342 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 MS4A15Q8N5U1 240 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 SYNPRQ8TBG9 265 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 ABCG5Q9H222 651 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 CD93Q9NPY3 652 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 MYH1P12882 1939 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 GNB3P16520 340 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 CAMK2DQ13557 499 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 HNRNPA1L2Q32P51 320 aaKnown RBP12.45□□□□□ -0.42
COL1A1-201ENST00000225964 TLDC1Q6P9B6 456 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 MDGA1Q8NFP4 955 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 OR5D14Q8NGL3 314 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 ZNF845Q96IR2 970 aaPredicted RBP12.45□□□□□ -0.42
COL1A1-201ENST00000225964 CLSTN3Q9BQT9 956 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 HAPLN2Q9GZV7 340 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 RABL2AQ9UBK7 228 aaPredicted RBP12.45□□□□□ -0.42
COL1A1-201ENST00000225964 RABL2BQ9UNT1 228 aa12.45□□□□□ -0.42
COL1A1-201ENST00000225964 TRAV27A0A087WT01 109 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 B4DXG7 233 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 IFNA17P01571 189 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 TFPTP0C1Z6 253 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 EFNA3P52797 238 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 HTD2P86397 168 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 PIN1Q13526 163 aaPredicted RBP12.44□□□□□ -0.42
COL1A1-201ENST00000225964 PRMT8Q9NR22 394 aaPredicted RBP12.44□□□□□ -0.42
COL1A1-201ENST00000225964 TESQ9UGI8 421 aaKnown RBP12.44□□□□□ -0.42
COL1A1-201ENST00000225964 MITFO75030 526 aaPredicted RBP12.44□□□□□ -0.42
COL1A1-201ENST00000225964 SLC43A1O75387 559 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 CNMDO75829 334 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 PSMB5P28074 263 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 HTR6P50406 440 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 ZNF420Q8TAQ5 688 aaPredicted RBP12.44□□□□□ -0.42
COL1A1-201ENST00000225964 HSPB6O14558 160 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 SIGLEC6O43699 453 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 EIF4EP06730 217 aaKnown RBP12.44□□□□□ -0.42
COL1A1-201ENST00000225964 ARSBP15848 533 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 TMEM11P17152 192 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 OR52W1Q6IF63 320 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 FBXW12Q6X9E4 464 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 CPOQ8IVL8 374 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 GPR26Q8NDV2 337 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 TSPAN15O95858 294 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 PCBD1P61457 104 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 MBTPS1Q14703 1052 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 STEAP4Q687X5 459 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 PFDN5Q99471 154 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 MICU1Q9BPX6 476 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 APMAPQ9HDC9 416 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 IL26Q9NPH9 171 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 ASF1BQ9NVP2 202 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 AKAP12Q02952 1782 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 A8MXE2 369 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 KDM4EB2RXH2 506 aaPredicted RBP12.44□□□□□ -0.42
COL1A1-201ENST00000225964 HSBP1L1C9JCN9 74 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 DCNP07585 359 aaKnown RBP12.44□□□□□ -0.42
COL1A1-201ENST00000225964 NFATC4Q14934 902 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 VASNQ6EMK4 673 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 FAM57BQ71RH2 274 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 ENPP4Q9Y6X5 453 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 BCAS1O75363 584 aaPredicted RBP12.44□□□□□ -0.42
COL1A1-201ENST00000225964 IGHG1P01857 330 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 PRSS3P35030 304 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 SIRPAP78324 504 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 ARHGAP19Q14CB8 494 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 SFRP5Q5T4F7 317 aa12.44□□□□□ -0.42
COL1A1-201ENST00000225964 SBSNQ6UWP8 590 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms