RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 GSDMCQ9BYG8 508 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 NEK6Q9HC98 313 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 CMC2Q9NRP2 79 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 TMEM74BQ9NUR3 256 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 CLDND1Q9NY35 253 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 CPNE7Q9UBL6 633 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 KCNE5Q9UJ90 142 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 MRPS2Q9Y399 296 aaKnown RBP20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 PCDHGB7Q9Y5F8 929 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 FANCMQ8IYD8 2048 aa20.38■□□□□ 0.85
SMARCD2-201ENST00000225742 KIR2DS5A0A0G2JLQ3 304 aa20.38■□□□□ 0.85
SMARCD2-201ENST00000225742 A0A0G2JNG1 304 aa20.38■□□□□ 0.85
SMARCD2-201ENST00000225742 ZNF860A6NHJ4 632 aa20.38■□□□□ 0.85
SMARCD2-201ENST00000225742 SLC22A31A6NKX4 558 aa20.38■□□□□ 0.85
SMARCD2-201ENST00000225742 KIR2DS3K7RE56 304 aa20.38■□□□□ 0.85
SMARCD2-201ENST00000225742 SLC19A2O60779 497 aa20.38■□□□□ 0.85
SMARCD2-201ENST00000225742 DRD5P21918 477 aa20.38■□□□□ 0.85
SMARCD2-201ENST00000225742 FXYD6P3P58550 94 aa20.38■□□□□ 0.85
SMARCD2-201ENST00000225742 KIR2DS5Q14953 304 aa20.38■□□□□ 0.85
SMARCD2-201ENST00000225742 EOGTQ5NDL2 527 aa20.38■□□□□ 0.85
SMARCD2-201ENST00000225742 PRPF38BQ5VTL8 546 aaKnown RBP20.38■□□□□ 0.85
SMARCD2-201ENST00000225742 WDR88Q6ZMY6 472 aa20.38■□□□□ 0.85
SMARCD2-201ENST00000225742 KLBQ86Z14 1044 aa20.38■□□□□ 0.85
SMARCD2-201ENST00000225742 VWA5B2Q8N398 1253 aa20.38■□□□□ 0.85
SMARCD2-201ENST00000225742 CSNK1A1LQ8N752 337 aa20.38■□□□□ 0.85
SMARCD2-201ENST00000225742 OR51G2Q8NGK0 314 aa20.38■□□□□ 0.85
SMARCD2-201ENST00000225742 RNF13O43567 381 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 LDB3O75112 727 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 GKN3PP0CG01 181 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 SLC35E2P0CK97 266 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 BMP8BP34820 402 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 GABRA3P34903 492 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 RABIFP47224 123 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 MTNR1BP49286 362 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 EVX1P49640 407 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 TPMTP51580 245 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 SHC2P98077 582 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 ADAM15Q13444 863 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 TAB1Q15750 504 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 SMARCD3Q6STE5 483 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 BMP8AQ7Z5Y6 402 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 GRAMD2AQ8IUY3 354 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 SLC2A12Q8TD20 617 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 SLC35B4Q969S0 331 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 BPIFA2Q96DR5 249 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 ALG8Q9BVK2 526 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 HDHD5Q9BXW7 423 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 PPP1R3EQ9H7J1 279 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 EVA1BQ9NVM1 165 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 COMMD3Q9UBI1 195 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 COL4A2P08572 1712 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 MEIOCA2RUB1 952 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 C12orf71A8MTZ7 269 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 PEX12O00623 359 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 LRRTM2O43300 516 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 RBM34P42696 430 aaKnown RBP20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 LSSP48449 732 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 GALEQ14376 348 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 NDUFA5Q16718 116 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 VASNQ6EMK4 673 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 CNIH2Q6PI25 160 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 Q6ZSR6 202 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 TMEM52Q8NDY8 209 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 PFN4Q8NHR9 129 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 PHOX2BQ99453 314 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 OR2B2Q9GZK3 357 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 C11orf54Q9H0W9 315 aaPredicted RBP20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 IL20RAQ9UHF4 553 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 MSRAQ9UJ68 235 aa20.37■□□□□ 0.85
SMARCD2-201ENST00000225742 PRR23D1E9PI22 279 aaPredicted RBP20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 GTPBP1O00178 669 aaKnown RBP20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 PRR23D2P0DMB1 279 aaPredicted RBP20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 F8A1P23610 371 aa20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 FOXK2Q01167 660 aa20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 FZD5Q13467 585 aa20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 GPALPP1Q8IXQ4 340 aa20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 ANKRD9Q96BM1 317 aaPredicted RBP20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 OTULINQ96BN8 352 aa20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 ZC3HAV1LQ96H79 300 aaKnown RBP20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 SNX18Q96RF0 628 aa20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 LMF2Q9BU23 707 aaKnown RBP20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 C8orf33Q9H7E9 229 aaPredicted RBP20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 TRIM36Q9NQ86 728 aa20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 TRPV5Q9NQA5 729 aa20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 FBXO34Q9NWN3 711 aa20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 HRASLS2Q9NWW9 162 aa20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 CLEC1BQ9P126 229 aa20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 SIGLEC7Q9Y286 467 aa20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 SLC35A3Q9Y2D2 325 aa20.36■□□□□ 0.85
SMARCD2-201ENST00000225742 DAPL1A0PJW8 107 aa20.35■□□□□ 0.85
SMARCD2-201ENST00000225742 FAM183AA6NL82 134 aa20.35■□□□□ 0.85
SMARCD2-201ENST00000225742 RIIAD1A6NNX1 92 aa20.35■□□□□ 0.85
SMARCD2-201ENST00000225742 C10orf142B7Z368 130 aa20.35■□□□□ 0.85
SMARCD2-201ENST00000225742 CHP2O43745 196 aa20.35■□□□□ 0.85
SMARCD2-201ENST00000225742 PTP4A3O75365 173 aa20.35■□□□□ 0.85
SMARCD2-201ENST00000225742 HOXD12P35452 270 aa20.35■□□□□ 0.85
SMARCD2-201ENST00000225742 TAS2R43P59537 309 aa20.35■□□□□ 0.85
SMARCD2-201ENST00000225742 ATAD3CQ5T2N8 411 aa20.35■□□□□ 0.85
SMARCD2-201ENST00000225742 TRIQKQ629K1 86 aa20.35■□□□□ 0.85
SMARCD2-201ENST00000225742 MZT2BQ6NZ67 158 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms