RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 RFX3P48380 749 aa16.34■□□□□ 0.21
PFN1-201ENST00000225655 CLK3P49761 638 aaKnown RBP16.34■□□□□ 0.21
PFN1-201ENST00000225655 ASCL1P50553 236 aa16.34■□□□□ 0.21
PFN1-201ENST00000225655 MNAT1P51948 309 aa16.34■□□□□ 0.21
PFN1-201ENST00000225655 RPS26P62854 115 aaKnown RBP16.34■□□□□ 0.21
PFN1-201ENST00000225655 FADDQ13158 208 aa16.34■□□□□ 0.21
PFN1-201ENST00000225655 GNA13Q14344 377 aa16.34■□□□□ 0.21
PFN1-201ENST00000225655 DUSP5Q16690 384 aa16.34■□□□□ 0.21
PFN1-201ENST00000225655 TNFAIP8L2Q6P589 184 aaPredicted RBP16.34■□□□□ 0.21
PFN1-201ENST00000225655 POMZP3Q6PJE2 187 aa16.34■□□□□ 0.21
PFN1-201ENST00000225655 YRDCQ86U90 279 aaKnown RBP16.34■□□□□ 0.21
PFN1-201ENST00000225655 WDSUB1Q8N9V3 476 aa16.34■□□□□ 0.21
PFN1-201ENST00000225655 CDS1Q92903 461 aa16.34■□□□□ 0.21
PFN1-201ENST00000225655 ROPN1LQ96C74 230 aa16.34■□□□□ 0.21
PFN1-201ENST00000225655 LRRC46Q96FV0 321 aa16.34■□□□□ 0.21
PFN1-201ENST00000225655 OR7D2Q96RA2 312 aa16.34■□□□□ 0.21
PFN1-201ENST00000225655 CALHM2Q9HA72 323 aa16.34■□□□□ 0.21
PFN1-201ENST00000225655 LIPT1Q9Y234 373 aa16.34■□□□□ 0.21
PFN1-201ENST00000225655 KIAA1549Q9HCM3 1950 aa16.34■□□□□ 0.21
PFN1-201ENST00000225655 DOCK7Q96N67 2140 aa16.33■□□□□ 0.21
PFN1-201ENST00000225655 C2orf72A6NCS6 295 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 MBD3L4A6NDZ8 208 aaPredicted RBP16.33■□□□□ 0.2
PFN1-201ENST00000225655 MBD3L3A6NE82 208 aaPredicted RBP16.33■□□□□ 0.2
PFN1-201ENST00000225655 MBD3L5A6NJ08 208 aaPredicted RBP16.33■□□□□ 0.2
PFN1-201ENST00000225655 NME6O75414 186 aaPredicted RBP16.33■□□□□ 0.2
PFN1-201ENST00000225655 CTAG2O75638 210 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 CPN1P15169 458 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 UQCRC1P31930 480 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 MAP3K8P41279 467 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 KIR2DL3P43628 341 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 ZNF136P52737 540 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 PNLIPRP2P54317 469 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 FAM91A1Q658Y4 838 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 ARPINQ7Z6K5 226 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 RETREG3Q86VR2 466 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 ZZZ3Q8IYH5 903 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 POU5F2Q8N7G0 328 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 MBD3L2Q8NHZ7 208 aaPredicted RBP16.33■□□□□ 0.2
PFN1-201ENST00000225655 PNPT1Q8TCS8 783 aaKnown RBP16.33■□□□□ 0.2
PFN1-201ENST00000225655 ZPLD1Q8TCW7 415 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 XAGE5Q8WWM1 108 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 PIK3R3Q92569 461 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 RNASE6Q93091 150 aaKnown RBP16.33■□□□□ 0.2
PFN1-201ENST00000225655 TRIB1Q96RU8 372 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 ADOQ96SZ5 270 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 CGREF1Q99674 301 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 THUMPD3Q9BV44 507 aaKnown RBP16.33■□□□□ 0.2
PFN1-201ENST00000225655 OR2B2Q9GZK3 357 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 HHATLQ9HCP6 504 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 FOXD3Q9UJU5 478 aaPredicted RBP16.33■□□□□ 0.2
PFN1-201ENST00000225655 MED12Q93074 2177 aa16.33■□□□□ 0.2
PFN1-201ENST00000225655 FBP2O00757 339 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 AIM2O14862 343 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 TSPAN2O60636 221 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 IL33O95760 270 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 OR12D1P0DN82 309 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 HPGDP15428 266 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.32■□□□□ 0.2
PFN1-201ENST00000225655 GTDC1Q4AE62 458 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 EXOSC6Q5RKV6 272 aaKnown RBP16.32■□□□□ 0.2
PFN1-201ENST00000225655 DCST2Q5T1A1 773 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.32■□□□□ 0.2
PFN1-201ENST00000225655 PLCZ1Q86YW0 608 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 OR5D16Q8NGK9 328 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 OR14L1PQ8NHC6 308 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 EFHD2Q96C19 240 aaPredicted RBP16.32■□□□□ 0.2
PFN1-201ENST00000225655 LRRC58Q96CX6 371 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 RCN3Q96D15 328 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 OTUB1Q96FW1 271 aaPredicted RBP16.32■□□□□ 0.2
PFN1-201ENST00000225655 CACYBPQ9HB71 228 aaKnown RBP16.32■□□□□ 0.2
PFN1-201ENST00000225655 SLC6A13Q9NSD5 602 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 VAPAQ9P0L0 249 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 P2RX2Q9UBL9 471 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 TAGLN3Q9UI15 199 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 AP3M1Q9Y2T2 418 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 WIF1Q9Y5W5 379 aa16.32■□□□□ 0.2
PFN1-201ENST00000225655 GXYLT2A0PJZ3 443 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 KCNK2O95069 426 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 CYP4B1P13584 511 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 DNAJA1P31689 397 aaKnown RBP16.31■□□□□ 0.2
PFN1-201ENST00000225655 NUDT2P50583 147 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 CASP9P55211 416 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 DSTNP60981 165 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 SNTB1Q13884 538 aaKnown RBP16.31■□□□□ 0.2
PFN1-201ENST00000225655 KRT72Q14CN4 511 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 RGNQ15493 299 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 ENPP6Q6UWR7 440 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 DLEU7Q6UYE1 221 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 TREML1Q86YW5 311 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 ZNF527Q8NB42 609 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 OR4N2Q8NGD1 307 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 RNF138Q8WVD3 245 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 DTNBP1Q96EV8 351 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 AURKBQ96GD4 344 aaPredicted RBP16.31■□□□□ 0.2
PFN1-201ENST00000225655 ANKRD27Q96NW4 1050 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 HOXD1Q9GZZ0 328 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 POLE3Q9NRF9 147 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 NDE1Q9NXR1 346 aa16.31■□□□□ 0.2
PFN1-201ENST00000225655 DNAJB12Q9NXW2 375 aaKnown RBP16.31■□□□□ 0.2
PFN1-201ENST00000225655 SLC25A37Q9NYZ2 338 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms