RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 CUBNO60494 3623 aa17.54■□□□□ 0.4
SYNGR1-201ENST00000216155 AZIN1O14977 448 aa17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 LSM1O15116 133 aaKnown RBP17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 SOX30O94993 753 aa17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 CPA3P15088 417 aa17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 ELK4P28324 431 aa17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 CRHR1P34998 444 aa17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 CARD18P57730 90 aa17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 RPS4XP62701 263 aaKnown RBP17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 ZNF117Q03924 483 aa17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 TNK1Q13470 666 aa17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 TSC22D1Q15714 1073 aa17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 PDSS1Q5T2R2 415 aa17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 ALKBH2Q6NS38 261 aa17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 ZCCHC12Q6PEW1 402 aa17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 GSPT2Q8IYD1 628 aaKnown RBP17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 CCDC63Q8NA47 563 aa17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 LRRN4CLQ8ND94 238 aa17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 FAM120BQ96EK7 910 aaKnown RBP17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 KLHL13Q9P2N7 655 aa17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 LAMP3Q9UQV4 416 aa17.53■□□□□ 0.4
SYNGR1-201ENST00000216155 FREM1Q5H8C1 2179 aa17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 NTN1O95631 604 aa17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 SHBGP04278 402 aa17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 SERPINB4P48594 390 aa17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 CCT5P48643 541 aa17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 POU6F2P78424 691 aaPredicted RBP17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 LASP1Q14847 261 aaKnown RBP17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 KANK2Q63ZY3 851 aa17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 GTF2IRD2BQ6EKJ0 949 aa17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 ADAM5Q6NVV9 412 aa17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 NUFIP2Q7Z417 695 aaKnown RBP17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 GTF2IRD2Q86UP8 949 aa17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 STEAP2Q8NFT2 490 aa17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 LILRB1Q8NHL6 650 aaPredicted RBP17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 CDS1Q92903 461 aa17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 CPNE4Q96A23 557 aaPredicted RBP17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 TACO1Q9BSH4 297 aaKnown RBP17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 BTBD2Q9BX70 525 aa17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 ZCCHC3Q9NUD5 404 aaKnown RBP17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 RNF115Q9Y4L5 304 aa17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 SONP18583 2426 aaKnown RBP17.52■□□□□ 0.4
SYNGR1-201ENST00000216155 OIP5O43482 229 aa17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 EFNA2O43921 213 aa17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 HSPA4LO95757 839 aa17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 LINC00032P0C843 101 aa17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 EIF1P41567 113 aaKnown RBP17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 RNF144AP50876 292 aaPredicted RBP17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 MLC1Q15049 377 aa17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 RNPS1Q15287 305 aaKnown RBP17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 TMEM201Q5SNT2 666 aa17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 CBLN3Q6UW01 205 aa17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 C10orf107Q8IVU9 208 aa17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 TUSC5Q8IXB3 177 aa17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 PHOSPHO1Q8TCT1 267 aa17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 STACQ99469 402 aa17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 COQ10BQ9H8M1 238 aa17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 DUSP22Q9NRW4 184 aa17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 GIN1Q9NXP7 522 aa17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 TMED5Q9Y3A6 229 aa17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 DNAJC15Q9Y5T4 150 aa17.51■□□□□ 0.39
SYNGR1-201ENST00000216155 FBN1P35555 2871 aaKnown RBP17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 CHD3Q12873 2000 aaKnown RBP17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 NPIPA5A0A0B4J1W7 369 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 NPIPA7E9PJI5 369 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 OVOL3O00110 214 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 CLOCKO15516 846 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 HMGN2P05204 90 aaKnown RBP17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 SOD3P08294 240 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 PABPC4LP0CB38 370 aaKnown RBP17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 NPIPA8P0DM63 369 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 BCKDHAP12694 445 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 VEZF1Q14119 521 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 PCLAFQ15004 111 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 TAB1Q15750 504 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 CLEC12BQ2HXU8 276 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 GALNTL6Q49A17 601 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 NCMAPQ5T1S8 102 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 SFRP5Q5T4F7 317 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 SEZ6L2Q6UXD5 910 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 CXXC5Q7LFL8 322 aaKnown RBP17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 MTERF4Q7Z6M4 381 aaKnown RBP17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 ATG4DQ86TL0 474 aaPredicted RBP17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 ZNF619Q8N2I2 560 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 MAPK1IP1LQ8NDC0 245 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 FBXO27Q8NI29 283 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 FBXW5Q969U6 566 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 MTERF3Q96E29 417 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 REXO5Q96IC2 774 aaKnown RBP17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 GATA5Q9BWX5 397 aaPredicted RBP17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 HDHD5Q9BXW7 423 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 PIGUQ9H490 435 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 ICAM5Q9UMF0 924 aa17.5■□□□□ 0.39
SYNGR1-201ENST00000216155 CR1P17927 2039 aa17.49■□□□□ 0.39
SYNGR1-201ENST00000216155 TMEM233B4DJY2 109 aa17.49■□□□□ 0.39
SYNGR1-201ENST00000216155 COPEO14579 308 aa17.49■□□□□ 0.39
SYNGR1-201ENST00000216155 SCAMP2O15127 329 aaKnown RBP17.49■□□□□ 0.39
SYNGR1-201ENST00000216155 DANCRP0C864 163 aa17.49■□□□□ 0.39
SYNGR1-201ENST00000216155 IL32P24001 234 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms