RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 MAGEB4O15481 346 aaPredicted RBP11.25□□□□□ -0.61
CHPF2-201ENST00000035307 SEC14L2O76054 403 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 PRSS23O95084 383 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 HK1P19367 917 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 FUT1P19526 365 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 CD27P26842 260 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 TNFSF8P32971 234 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 SLC35A2P78381 396 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 TCEAL6Q6IPX3 200 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 OR6Q1Q8NGQ2 317 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 OR13C2Q8NGS9 318 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 HCAR2Q8TDS4 363 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 TNFAIP8L1Q8WVP5 186 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 SPRYD4Q8WW59 207 aaPredicted RBP11.25□□□□□ -0.61
CHPF2-201ENST00000035307 TCEAL3Q969E4 200 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.25□□□□□ -0.61
CHPF2-201ENST00000035307 LIPT1Q9Y234 373 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 R4GN57 208 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 SH3D21A4FU49 640 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 LRIT2A6NDA9 550 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 TVP23AA6NH52 213 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 ORC5O43913 435 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 CLEC3AO75596 197 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 SDHBP21912 280 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 TOMM5Q8N4H5 51 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 PARP16Q8N5Y8 322 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 MOSPD2Q8NHP6 518 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 HRASLS5Q96KN8 279 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 FRMD6Q96NE9 622 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 POLDIP3Q9BY77 421 aaKnown RBP11.25□□□□□ -0.61
CHPF2-201ENST00000035307 ATP13A2Q9NQ11 1180 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 LYARQ9NX58 379 aaKnown RBP11.25□□□□□ -0.61
CHPF2-201ENST00000035307 ING4Q9UNL4 249 aa11.25□□□□□ -0.61
CHPF2-201ENST00000035307 A0A0J9YY10 115 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 C2orf72A6NCS6 295 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 PRKYO43930 277 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 PIP5K1CO60331 668 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 PKLRP30613 574 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 PDX1P52945 283 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 OC90Q02509 493 aaPredicted RBP11.24□□□□□ -0.61
CHPF2-201ENST00000035307 FZD2Q14332 565 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 TRMT12Q53H54 448 aaKnown RBP11.24□□□□□ -0.61
CHPF2-201ENST00000035307 GPAT4Q86UL3 456 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 NKAIN4Q8IVV8 208 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 JAGN1Q8N5M9 183 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 OR8S1Q8NH09 359 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 TMEM255BQ8WV15 326 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 CSF3RQ99062 836 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 SLC25A18Q9H1K4 315 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 PELI2Q9HAT8 420 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 ALKBH4Q9NXW9 302 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 STUB1Q9UNE7 303 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 IGHV1OR15-9A0A0B4J2B8 117 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 SPTY2D1-AS1A0A0U1RR47 76 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 A0A1W2PQ09 198 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 A8MVJ9 347 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 SOCS6O14544 535 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 MT-ND5P03915 603 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 DBIP07108 87 aaKnown RBP11.24□□□□□ -0.61
CHPF2-201ENST00000035307 GIMD1P0DJR0 217 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 MMP11P24347 488 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 ELAVL4P26378 380 aaKnown RBP11.24□□□□□ -0.61
CHPF2-201ENST00000035307 TRIM23P36406 574 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 RACK1P63244 317 aaKnown RBP11.24□□□□□ -0.61
CHPF2-201ENST00000035307 DECR1Q16698 335 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 VWA2Q5GFL6 755 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 TUBA3EQ6PEY2 450 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 SYNPOQ8N3V7 929 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 CELF2-AS1Q8N7Q2 184 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 CNDP2Q96KP4 475 aaKnown RBP11.24□□□□□ -0.61
CHPF2-201ENST00000035307 SPATA9Q9BWV2 254 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 ABCG5Q9H222 651 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 NEK6Q9HC98 313 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 FAM60AQ9NP50 221 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 ACER3Q9NUN7 267 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 GPN3Q9UHW5 284 aaPredicted RBP11.24□□□□□ -0.61
CHPF2-201ENST00000035307 PSORS1C1Q9UIG5 152 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 TMEFF2Q9UIK5 374 aaPredicted RBP11.24□□□□□ -0.61
CHPF2-201ENST00000035307 SLC17A4Q9Y2C5 497 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 AK6Q9Y3D8 172 aaKnown RBP11.24□□□□□ -0.61
CHPF2-201ENST00000035307 HSPE1-MOB4S4R3N1 261 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 TRBV2A0A0J9YWF9 115 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 AGAP5A6NIR3 686 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 A6NL46 340 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 NTN1O95631 604 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 CLDN6P56747 220 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 BTG2P78543 158 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 FAM69BQ5VUD6 431 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 SYT13Q7L8C5 426 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 ZNF627Q7L945 461 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 OR52R1Q8NGF1 315 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.24□□□□□ -0.61
CHPF2-201ENST00000035307 EDAQ92838 391 aa11.24□□□□□ -0.61
CHPF2-201ENST00000035307 EIF3KQ9UBQ5 218 aaKnown RBP11.24□□□□□ -0.61
CHPF2-201ENST00000035307 AGAP14A8MT82 685 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 H7C1C5 153 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 FOXE1O00358 373 aaPredicted RBP11.23□□□□□ -0.61
CHPF2-201ENST00000035307 DLGAP1O14490 977 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 SLC16A6O15403 523 aa11.23□□□□□ -0.61
CHPF2-201ENST00000035307 WNT4P56705 351 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms