RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Metap1dQ9CPW9 335 aa17.3■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Nup98Q6PFD9 1816 aaKnown RBP17.3■□□□□ 0.36
Scaf11-201ENSMUST00000047835 PthlhP22858 175 aa17.3■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Ugt2b36Q3UEP4 530 aa17.3■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Gcnt7Q3V3K7 433 aa17.3■□□□□ 0.36
Scaf11-201ENSMUST00000047835 H2-M10.5Q85ZW7 330 aa17.3■□□□□ 0.36
Scaf11-201ENSMUST00000047835 FntbQ8K2I1 437 aa17.3■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Q8R3Y5 413 aa17.3■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Clec2fQ8VI21 196 aa17.3■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Cdc7Q9Z0H0 564 aa17.3■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Sult2a6B2RVI8 285 aa17.3■□□□□ 0.36
Scaf11-201ENSMUST00000047835 KitlgP20826 273 aa17.3■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Zc3hc1Q80YV2 501 aa17.3■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Pink1Q99MQ3 580 aa17.3■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Ccnl2Q9JJA7 518 aa17.3■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Ubr2Q6WKZ8 1755 aa17.3■□□□□ 0.36
Scaf11-201ENSMUST00000047835 CntrlA2AL36 2334 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Prss56F2YMG0 604 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Alox12eP55249 662 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 VaspP70460 375 aaKnown RBP17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 NfkbidQ2TB02 327 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Hs6st2Q80UW0 612 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Gpr20Q8BYC4 358 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Pgm2l1Q8CAA7 621 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Hdac8Q8VH37 377 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Ndor1A2AI05 598 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Gm20431E9PY39 371 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Gm3636E9Q5P1 227 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Prdx4O08807 274 aaKnown RBP17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Acta2P62737 377 aaKnown RBP17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Actg2P63268 376 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Ebf1Q07802 591 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 A1bgQ19LI2 512 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Slc35a1Q61420 336 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Tmem151aQ6GQT5 468 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 C8gQ8VCG4 202 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 GmfbQ9CQI3 142 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Tmem9Q9CR23 183 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 L3hypdhQ9CXA2 354 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Efcab11Q9D0E5 162 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Tssk4Q9D411 328 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Dennd6bQ9D9V7 585 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Moap1Q9ERH6 352 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Gm13283A0A087WPG5 182 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Tango2P54797 276 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 BC080695Q66JY9 481 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Olfr714Q7TRN0 317 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Klhl13Q80TF4 654 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Spag1Q80ZX8 901 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Olfr649Q8VGW1 312 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Slc2a10Q8VHD6 536 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Cst14Q8VII3 130 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Hrasls5Q9CPX5 270 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Nme7Q9QXL8 395 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Vmn2r105E9Q3A5 860 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Dvl3Q61062 716 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Gorasp1Q91X51 446 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Entpd4Q9DBT4 613 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Plod2Q9R0B9 737 aa17.29■□□□□ 0.36
Scaf11-201ENSMUST00000047835 A0A1L1STL9 112 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Gm8882E9Q7E4 283 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Fgf3P05524 245 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Kyat1Q8BTY1 424 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Pithd1Q8BWR2 211 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Lyrm4Q8K215 91 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Vmn1r74Q8R290 304 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Actl6bQ99MR0 426 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Zmynd19Q9CQG3 227 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Ppp1r35Q9D8C8 260 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Praf2Q9JIG8 178 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 4930451I11RikE9Q9R3 111 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Dcaf13Q6PAC3 445 aaKnown RBP17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Q8R3C1 574 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Olfr522Q8VGL1 312 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 PrkraQ9WTX2 313 aaKnown RBP17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Ramp2Q9WUP0 189 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Orc5Q9WUV0 435 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Rhox1B1APN4 224 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Scgb2b3D2XZ38 112 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Folr1P35846 255 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 JupQ02257 745 aaKnown RBP17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 CalcrQ60755 533 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Elfn2Q68FM6 823 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Olfr776Q7TRI3 312 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Ubr7Q8BU04 425 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Syt8Q9R0N6 395 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Gm10608E9PZ13 166 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 BC117090L7N257 96 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 P01807 119 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Apex2Q68G58 516 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Map6Q7TSJ2 906 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Kiaa1671Q8BRV5 308 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Vmn1r53Q9EP93 310 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 ScelQ9EQG3 652 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Fgf21Q9JJN1 210 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Tas2r103Q9JKA3 312 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 BC025446A0A087WQT1 134 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Tssk2O54863 358 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Pip5k1cO70161 661 aa17.28■□□□□ 0.36
Scaf11-201ENSMUST00000047835 Slc44a5Q5RJI2 710 aa17.28■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms