RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 ALPK1Q96QP1 1244 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 ACER3Q9NUN7 267 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 HCN3Q9P1Z3 774 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 NXT1Q9UKK6 140 aaKnown RBP15.91■□□□□ 0.14
PHGDH-234ENST00000642041 AGAP5A6NIR3 686 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 POLR1CO15160 346 aaPredicted RBP15.9■□□□□ 0.14
PHGDH-234ENST00000642041 SNAP29O95721 258 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 OPN1SWP03999 348 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 IFNA16P05015 189 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 AGXTP21549 392 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 RPL5P46777 297 aaKnown RBP15.9■□□□□ 0.14
PHGDH-234ENST00000642041 NR1H2P55055 460 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 CASP9P55211 416 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 DUSP2Q05923 314 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 KCNAB1Q14722 419 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 INPP5JQ15735 1006 aaPredicted RBP15.9■□□□□ 0.14
PHGDH-234ENST00000642041 DCST2Q5T1A1 773 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 RNF220Q5VTB9 566 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 MLIPQ5VWP3 458 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 FAM111BQ6SJ93 734 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 RRM2BQ7LG56 351 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 PPP1R3BQ86XI6 285 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 ZNF440Q8IYI8 595 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 BMPERQ8N8U9 685 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 SMYD1Q8NB12 490 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 SLC16A11Q8NCK7 471 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 MORN4Q8NDC4 146 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 OR4C15Q8NGM1 316 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 ARHGDIGQ99819 225 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 ZPBPQ9BS86 351 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 TEX12Q9BXU0 123 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 GABARAPL3Q9BY60 117 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 EQTNQ9NQ60 294 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 PAPOLBQ9NRJ5 636 aaKnown RBP15.9■□□□□ 0.14
PHGDH-234ENST00000642041 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.9■□□□□ 0.14
PHGDH-234ENST00000642041 POLHQ9Y253 713 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 TMEM184BQ9Y519 407 aaPredicted RBP15.9■□□□□ 0.14
PHGDH-234ENST00000642041 PCDHGA10Q9Y5H3 936 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 MRPS18BQ9Y676 258 aaKnown RBP15.9■□□□□ 0.14
PHGDH-234ENST00000642041 CLCA3PQ9Y6N3 262 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 U3KQV3 271 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 CCDC168Q8NDH2 2452 aa15.9■□□□□ 0.14
PHGDH-234ENST00000642041 IGLV3-12A0A075B6K2 115 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 SMIM31A0A1B0GVY4 71 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 FAM227AF5H4B4 570 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 H3BNH8 94 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 HCRTR1O43613 425 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 CLPTM1O96005 669 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 CHRM4P08173 479 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 CCDC159P0C7I6 412 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 CCNYL3P0C7X3 344 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 UBTFL6P0CB48 400 aaPredicted RBP15.89■□□□□ 0.13
PHGDH-234ENST00000642041 FOLR1P15328 257 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 LIMS1P48059 325 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 CDH12P55289 794 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 LTB4RQ15722 352 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 DUSP5Q16690 384 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 NADK2Q4G0N4 442 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 TBPL2Q6SJ96 375 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 GRAMD2AQ8IUY3 354 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 OFCC1Q8IZS5 231 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 C17orf47Q8NEP4 570 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 OR52R1Q8NGF1 315 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 HDAC2Q92769 488 aaKnown RBP15.89■□□□□ 0.13
PHGDH-234ENST00000642041 CDS1Q92903 461 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 FBXL20Q96IG2 436 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 C5orf34Q96MH7 638 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 LRFN5Q96NI6 719 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 YIPF2Q9BWQ6 316 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 TOR3AQ9H497 397 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 NMNAT1Q9HAN9 279 aaPredicted RBP15.89■□□□□ 0.13
PHGDH-234ENST00000642041 SIDT1Q9NXL6 827 aaKnown RBP15.89■□□□□ 0.13
PHGDH-234ENST00000642041 SLC5A6Q9Y289 635 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 TNRC6AQ8NDV7 1962 aaKnown RBP15.89■□□□□ 0.13
PHGDH-234ENST00000642041 CCDC88CQ9P219 2028 aa15.89■□□□□ 0.13
PHGDH-234ENST00000642041 KIAA0513O60268 411 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 OR5F1O95221 314 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 C1QCP02747 245 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 ACP2P11117 423 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 FGF5P12034 268 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 NID1P14543 1247 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 RPS4Y1P22090 263 aaKnown RBP15.88■□□□□ 0.13
PHGDH-234ENST00000642041 GABRA3P34903 492 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 STAT5AP42229 794 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 GABARAPL2P60520 117 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 DCDP81605 110 aaKnown RBP15.88■□□□□ 0.13
PHGDH-234ENST00000642041 MC2RQ01718 297 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 CHRNEQ04844 493 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 ZNF155Q12901 538 aaPredicted RBP15.88■□□□□ 0.13
PHGDH-234ENST00000642041 NPRL3Q12980 569 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 TRAM2Q15035 370 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 TYW3Q6IPR3 259 aaKnown RBP15.88■□□□□ 0.13
PHGDH-234ENST00000642041 CD300LDQ6UXZ3 194 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 FRRS1Q6ZNA5 592 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 ZNF550Q7Z398 422 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 TMEM151BQ8IW70 566 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 RNF113BQ8IZP6 322 aaKnown RBP15.88■□□□□ 0.13
PHGDH-234ENST00000642041 ZNF527Q8NB42 609 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 GPR32P1Q8NGA4 272 aa15.88■□□□□ 0.13
PHGDH-234ENST00000642041 FAM110BQ8TC76 370 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms