RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ULK3Q6PHR2 472 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 KLHL17Q6TDP4 642 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 TMEM205Q6UW68 189 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 CASP12Q6UXS9 341 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 RASSF6Q6ZTQ3 369 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 GDF7Q7Z4P5 450 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 ANKRD37Q7Z713 158 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 RBM45Q8IUH3 476 aaKnown RBP8.98□□□□□ -0.97
PHGDH-215ENST00000641371 ALDH16A1Q8IZ83 802 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 SIMC1Q8NDZ2 872 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 OR2I1PQ8NGU4 316 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 FAM81AQ8TBF8 368 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 TEX47Q8TBZ9 253 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 MYDGFQ969H8 173 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 GTPBP3Q969Y2 492 aaKnown RBP8.98□□□□□ -0.97
PHGDH-215ENST00000641371 ADIPOR1Q96A54 375 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 NACC2Q96BF6 587 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 ZG16BQ96DA0 208 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 LIN37Q96GY3 246 aaPredicted RBP8.98□□□□□ -0.97
PHGDH-215ENST00000641371 NIPSNAP1Q9BPW8 284 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 CRB3Q9BUF7 120 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 DDA1Q9BW61 102 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 SLC19A3Q9BZV2 496 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 NDEL1Q9GZM8 345 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 WWTR1Q9GZV5 400 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 SOX17Q9H6I2 414 aaPredicted RBP8.98□□□□□ -0.97
PHGDH-215ENST00000641371 SLC25A19Q9HC21 320 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 SLC22A11Q9NSA0 550 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 MAN2C1Q9NTJ4 1040 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 CLN6Q9NWW5 311 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 SLC39A1Q9NY26 324 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 CTSFQ9UBX1 484 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 MED31Q9Y3C7 131 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 CHST2Q9Y4C5 530 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 PCDHGB6Q9Y5F9 930 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 PCDHGB1Q9Y5G3 927 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 PCDHGA6Q9Y5G7 932 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 A0A087WUU8 490 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 OR6C70A6NIJ9 312 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 H3BN98 237 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 PEX12O00623 359 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 HYAL3O43820 417 aaPredicted RBP8.97□□□□□ -0.97
PHGDH-215ENST00000641371 EIF4E2O60573 245 aaKnown RBP8.97□□□□□ -0.97
PHGDH-215ENST00000641371 PPM1BO75688 479 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 CLIC3O95833 236 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 PNMTP11086 282 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 CYP4B1P13584 511 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 ATP6V1B1P15313 513 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 CHMP24386 653 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 SNRPGP62308 76 aaKnown RBP8.97□□□□□ -0.97
PHGDH-215ENST00000641371 PLCXD2Q0VAA5 305 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 PTGES3Q15185 160 aaKnown RBP8.97□□□□□ -0.97
PHGDH-215ENST00000641371 SEC23BQ15437 767 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 EXT1Q16394 746 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 MAPK14Q16539 360 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 KLHL26Q53HC5 615 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 SLC25A30Q5SVS4 291 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 TMEM164Q5U3C3 297 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 PRAMEF17Q5VTA0 474 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 HSDL2Q6YN16 418 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 NUP54Q7Z3B4 507 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 CPEB2Q7Z5Q1 589 aaKnown RBP8.97□□□□□ -0.97
PHGDH-215ENST00000641371 GPR141Q7Z602 305 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 DND1Q8IYX4 353 aaKnown RBP8.97□□□□□ -0.97
PHGDH-215ENST00000641371 CYP4Z2PQ8N1L4 340 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 SLC15A4Q8N697 577 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 ZNF614Q8N883 585 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 ZNF441Q8N8Z8 693 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 FAM71CQ8NEG0 241 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 OR8J1Q8NGP2 316 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 RHOXF1Q8NHV9 184 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 C9orf43Q8TAL5 461 aaPredicted RBP8.97□□□□□ -0.97
PHGDH-215ENST00000641371 FCGR1BQ92637 280 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 DGCR14Q96DF8 476 aaKnown RBP8.97□□□□□ -0.97
PHGDH-215ENST00000641371 DEPDC7Q96QD5 511 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 SLC38A2Q96QD8 506 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 TAAR9Q96RI9 348 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 EDEM2Q9BV94 578 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 NUDT9Q9BW91 350 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 RSPO3Q9BXY4 272 aaPredicted RBP8.97□□□□□ -0.97
PHGDH-215ENST00000641371 SEMA4GQ9NTN9 838 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 MED17Q9NVC6 651 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 RLIMQ9NVW2 624 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 WDR70Q9NW82 654 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 OCIAD1Q9NX40 245 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 DNAJB12Q9NXW2 375 aaKnown RBP8.97□□□□□ -0.97
PHGDH-215ENST00000641371 CNOT2Q9NZN8 540 aaKnown RBP8.97□□□□□ -0.97
PHGDH-215ENST00000641371 RHCGQ9UBD6 479 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 BAIAP2Q9UQB8 552 aa8.97□□□□□ -0.97
PHGDH-215ENST00000641371 LOC102723996A0A087X1L8 192 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 A0A0B4J2E0 115 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 A0A1B0GX12 115 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 EFCAB10A6NFE3 127 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 A8MUA0 341 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 ALG1L2C9J202 215 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 HRKO00198 91 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 ZNF264O43296 627 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 NOL3O60936 208 aaKnown RBP8.96□□□□□ -0.98
PHGDH-215ENST00000641371 ZFAND5O76080 213 aa8.96□□□□□ -0.98
PHGDH-215ENST00000641371 OR6B1O95007 311 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms