RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 CD8B2A6NJW9 211 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 PLOD2O00469 737 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 ACOX3O15254 700 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 SEC22BO75396 215 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 ERN1O75460 977 aaKnown RBP7.1□□□□□ -1.27
PNKP-229ENST00000637897 CTAG2O75638 210 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 RSL1D1O76021 490 aaKnown RBP7.1□□□□□ -1.27
PNKP-229ENST00000637897 TGM6O95932 706 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 PRPS2P11908 318 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 GABRA1P14867 456 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 CPN1P15169 458 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 SDC1P18827 310 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 CAPN3P20807 821 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 MAPK1P28482 360 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 FRKP42685 505 aaPredicted RBP7.1□□□□□ -1.27
PNKP-229ENST00000637897 SUCLG1P53597 346 aaKnown RBP7.1□□□□□ -1.27
PNKP-229ENST00000637897 NME5P56597 212 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 SESN3P58005 492 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 UFM1P61960 85 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 ACSM2AQ08AH3 577 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 ZNF763Q0D2J5 394 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 C2orf80Q0P641 193 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 BNIP2Q12982 314 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 SNTA1Q13424 505 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 NFYCQ13952 458 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 TRIM25Q14258 630 aaKnown RBP7.1□□□□□ -1.27
PNKP-229ENST00000637897 VPS26BQ4G0F5 336 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 RFTN2Q52LD8 501 aaPredicted RBP7.1□□□□□ -1.27
PNKP-229ENST00000637897 IL23RQ5VWK5 629 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 HLA-DQA1Q5Y7H0 255 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 ACSM2BQ68CK6 577 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 SLC30A6Q6NXT4 461 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 ARSKQ6UWY0 536 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 TMEM107Q6UX40 140 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 C22orf34Q6ZV56 151 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 SLC44A2Q8IWA5 706 aaPredicted RBP7.1□□□□□ -1.27
PNKP-229ENST00000637897 EID3Q8N140 333 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 OR2L13Q8N349 312 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 OR1J4Q8NGS1 313 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 ABTB1Q969K4 478 aaPredicted RBP7.1□□□□□ -1.27
PNKP-229ENST00000637897 LRRC58Q96CX6 371 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 ELP4Q96EB1 424 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 METTL2AQ96IZ6 378 aaKnown RBP7.1□□□□□ -1.27
PNKP-229ENST00000637897 COL21A1Q96P44 957 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 UCN2Q96RP3 112 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 GPATCH1Q9BRR8 931 aaKnown RBP7.1□□□□□ -1.27
PNKP-229ENST00000637897 TACO1Q9BSH4 297 aaKnown RBP7.1□□□□□ -1.27
PNKP-229ENST00000637897 LMF2Q9BU23 707 aaKnown RBP7.1□□□□□ -1.27
PNKP-229ENST00000637897 C1orf50Q9BV19 199 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 FAIM2Q9BWQ8 316 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 TRIM15Q9C019 465 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 MUC13Q9H3R2 512 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 EXO5Q9H790 373 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 SLC52A3Q9NQ40 469 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 SIRT3Q9NTG7 399 aaPredicted RBP7.1□□□□□ -1.27
PNKP-229ENST00000637897 RYDENQ9NUL5 291 aaKnown RBP7.1□□□□□ -1.27
PNKP-229ENST00000637897 FBXO34Q9NWN3 711 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 C6orf203Q9P0P8 240 aaPredicted RBP7.1□□□□□ -1.27
PNKP-229ENST00000637897 ABCD2Q9UBJ2 740 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 PRODH2Q9UF12 536 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 KCNN3Q9UGI6 736 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 CD300AQ9UGN4 299 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 ITGB1BP2Q9UKP3 347 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 C19orf53Q9UNZ5 99 aaPredicted RBP7.1□□□□□ -1.27
PNKP-229ENST00000637897 TMED5Q9Y3A6 229 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 LRRC42Q9Y546 428 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 WIF1Q9Y5W5 379 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 ZNF780BQ9Y6R6 833 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 FBN3Q75N90 2809 aa7.1□□□□□ -1.27
PNKP-229ENST00000637897 ROS1P08922 2347 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 A0A087WV62 115 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 GNG14A0A1W2PPG7 69 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 SHISA8B8ZZ34 492 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 ACOT8O14734 319 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 ANKRD28O15084 1053 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 SIAH2O43255 324 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 HCRTR2O43614 444 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 DNAJA2O60884 412 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 GUCY1B2O75343 617 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 REM1O75628 298 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 TNFSF13O75888 250 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 BAG2O95816 211 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 IL6P05231 212 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 G6PDP11413 515 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 HSD17B1P14061 328 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 ZNF708P17019 499 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 EFNA1P20827 205 aaPredicted RBP7.09□□□□□ -1.27
PNKP-229ENST00000637897 BMP5P22003 454 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 TCEA1P23193 301 aaKnown RBP7.09□□□□□ -1.27
PNKP-229ENST00000637897 DNAJA1P31689 397 aaKnown RBP7.09□□□□□ -1.27
PNKP-229ENST00000637897 MASP1P48740 699 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 TMED10P49755 219 aaKnown RBP7.09□□□□□ -1.27
PNKP-229ENST00000637897 NCBP2P52298 156 aaKnown RBP eCLIP7.09□□□□□ -1.27
PNKP-229ENST00000637897 SLC7A2P52569 658 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 CLNS1AP54105 237 aaKnown RBP7.09□□□□□ -1.27
PNKP-229ENST00000637897 PNLIPRP2P54317 469 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 NRG3P56975 720 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 DCAF7P61962 342 aa7.09□□□□□ -1.27
PNKP-229ENST00000637897 RPL38P63173 70 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms