RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 MS4A15Q8N5U1 240 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 OR52P1PQ8NH57 321 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 FAM174AQ8TBP5 190 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 SLC7A13Q8TCU3 470 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 DEDD2Q8WXF8 326 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 AUTS2Q8WXX7 1259 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 MED30Q96HR3 178 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TMEM43Q9BTV4 400 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF717Q9BY31 904 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 OSGEPL1Q9H4B0 414 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 MVB12BQ9H7P6 319 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 LMAN1LQ9HAT1 526 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 RANGRFQ9HD47 186 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 MRPS30Q9NP92 439 aaKnown RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TMEM184CQ9NVA4 438 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 EMC3Q9P0I2 261 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 DEC1Q9P2X7 70 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 CLEC4EQ9ULY5 219 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 MRPS23Q9Y3D9 190 aaKnown RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 NUBP2Q9Y5Y2 271 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 CHURC1-FNTBB4DL54 471 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 PLPP1O14494 284 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 AK1P00568 194 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 MYOGP15173 224 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 MMP11P24347 488 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 NDUFS1P28331 727 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 PKLRP30613 574 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 PRKAR1BP31321 381 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 ETV5P41161 510 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 HTR2BP41595 481 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 GZMKP49863 264 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 ETV1P50549 477 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 SLC16A1P53985 500 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 CLDN20P56880 219 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 DEFB103AP81534 67 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 RELQ04864 619 aaPredicted RBP3.72□□□□□ -1.81
SCN1A-214ENST00000637038 ACSM1Q08AH1 577 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 HYAL2Q12891 473 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 SSPNQ14714 243 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 LASP1Q14847 261 aaKnown RBP3.72□□□□□ -1.81
SCN1A-214ENST00000637038 TEAD2Q15562 447 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 BAK1Q16611 211 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 TMEM52BQ4KMG9 183 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 IGSF11Q5DX21 431 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 NDUFAF5Q5TEU4 345 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 NXNL2Q5VZ03 156 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 HBMQ6B0K9 141 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF782Q6ZMW2 699 aaPredicted RBP3.72□□□□□ -1.81
SCN1A-214ENST00000637038 ERN2Q76MJ5 926 aaKnown RBP3.72□□□□□ -1.81
SCN1A-214ENST00000637038 NRROSQ86YC3 692 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 FAM109AQ8N4B1 249 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 YIPF7Q8N8F6 280 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 Q8N9G6 341 aaPredicted RBP3.72□□□□□ -1.81
SCN1A-214ENST00000637038 SYT14Q8NB59 555 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 DUSP18Q8NEJ0 188 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 OR8H1Q8NGG4 311 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 OR5K2Q8NHB8 316 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 TTC9Q92623 222 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 LMLNQ96KR4 655 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 NEDD4LQ96PU5 975 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 CD180Q99467 661 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 MCHR1Q99705 422 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 DPH7Q9BTV6 452 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 KATNB1Q9BVA0 655 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 VN1R3Q9BXE9 311 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 ACTRT3Q9BYD9 372 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 SLITRK2Q9H156 845 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 FN3KQ9H479 309 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 DDX31Q9H8H2 851 aaKnown RBP3.72□□□□□ -1.81
SCN1A-214ENST00000637038 KLHL1Q9NR64 748 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 GPATCH2Q9NW75 528 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 IL20Q9NYY1 176 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 CLEC1BQ9P126 229 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF222Q9UK12 451 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 HSPB11Q9Y547 144 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 NOX1Q9Y5S8 564 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 ALG5Q9Y673 324 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF318Q5VUA4 2279 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 LAMA1P25391 3075 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 TTC28Q96AY4 2481 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 CACNA1GO43497 2377 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 BLACEA4D250 179 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 UNC119BA6NIH7 251 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 C3orf80F5H4A9 247 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 GABRPO00591 440 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 LRRTM2O43300 516 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 ERI3O43414 337 aaKnown RBP3.72□□□□□ -1.81
SCN1A-214ENST00000637038 TSC22D2O75157 780 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 TMEM127O75204 238 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 RFPL3O75679 317 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 SERPINI2O75830 405 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 IFNA16P05015 189 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 LAMP2P13473 410 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF3P17036 446 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 NAGAP17050 411 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 NOS3P29474 1203 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 EVI2BP34910 448 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 BSGP35613 385 aa3.72□□□□□ -1.81
SCN1A-214ENST00000637038 AHRP35869 848 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms